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. 2013 Oct 21;13(2):172–187. doi: 10.1093/bfgp/elt041

Table 2:

At least five sex-associated regions were identified in zebrafish strains by genome-wide studies

Cross-typea Method Marker densityb (kb) Chr Chr location (Zv9) Genetic interval References
IN × AB SNP typing 3.80 5 44 453 011–46 626 084 1.7 cM [24]
IN × AB SNP typing 3.80 16 12 952 287–16 952 809 3.5 cM [24]
AB# × NA SNP typing 357.38 4 60 837 953–62 094 675 >1 cM [25]
NA × AB# SNP typing 295.82 4 60 837 953–62 094 676 >1 cM [25]
NA × AB# SNP typing 295.82 3 15 234 176–29 193 306 5.8 cM [25]
AB × Tu SNP typing 13.62 16 ∼19–22 Mb N/P [95]
AB × AB; Toh × Toh aCGH 15.74 N/A N/A N/A [26]

Note: aFor the first three studies [24, 25, 95], brooders from two different varieties were crossed (males shown first), then F1 full-sib cross was performed to produce the F2 mapping family. For the fourth study [26], two pairs of brooders each from two strains were crossed. The parents and four of their offspring from each cross were analyzed.

bBased on 1.714 Gb genome size (Gregory TR. Animal Genome Size Database. http://www.genomesize.com). IN, wild-type from Northeast India; AB, AB stock; AB#, AB stocks derived from Streisinger's original AB line; NA, Nadia stocks originated from Indian wild-type from the Kolkata region; Tu, Tubingen line; Toh, a farm-derived strain from Singapore; N/P, not provided; N/A, not applicable.