Table 1:
Mutagenesis resources and databases for zebrafish research
| Tools | Description | Website |
|---|---|---|
| Zebrafish Insertion Collection (ZInC) | Database of retroviral insertional mutants. | http://research.nhgri.nih.gov/zinc |
| Zebrafish Mutagenesis Project (ZMP) | Resource for loss-of-function mutations and phenotypes. | http://www.sanger.ac.uk/Projects/D_rerio/zmp/ |
| Zebrafish TILLING project | Database of loss-of-function mutations from TILLING project. | https://webapps.fhcrc.org/science/tilling/index.php |
| zfishbook | The International Protein trap consortium. | http://zfishbook.org/ |
| Digital Fish | Database of conditional Flip Trap lines | http://www.fliptrap.org/static/index_new.html |
| zCre | A database of Cre/lox based tools. | http://zcre.org.uk/Overview.html |
| CreZoo | Database of CreERT2 driver lines. | http://crezoo.crt-dresden.de/crezoo/ |
| zTrap | Database of gene traps and enhancer traps | http://kawakami.lab.nig.ac.jp/ztrap/ |
| ZIFIT | Tools to design ZFN,TALEN and CRISPR. | http://zifit.partners.org/ZiFiT/ |
| MOJO Hand | TALEN design tool | http://talendesign.com/mojohand_main.php |
| MegaMapper | A computational pipeline for positional cloning of mutations by whole-genome sequencing. | https://wiki.med.harvard.edu/SysBio/Megason/MegaMapper |
| MMAPPR | Analysis pipeline for mapping mutations using RNA-seq. | http://yost.genetics.utah.edu/software.php |