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. Author manuscript; available in PMC: 2015 Apr 14.
Published in final edited form as: Phys Chem Chem Phys. 2013 Dec 10;16(14):6367–6375. doi: 10.1039/c3cp53655f

Figure 2.

Figure 2

Representative structures for (a) the undocked state and (b) the docked state. “TL” represents the GAAA tetraloop, and “R” represents the receptor, both the GAAA tetraloop and the receptor parts are marked with red color. (c) and (d) show the conformational ensemble of the undocked and the docked states, respectively.