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. Author manuscript; available in PMC: 2015 Mar 16.
Published in final edited form as: IEEE Trans Med Imaging. 2013 Sep 16;32(12):2348–2363. doi: 10.1109/TMI.2013.2282126

Fig. 8.

Fig. 8

(a) and (b) show an atlas pair consisting of MPRAGE and T2-w scans of a normal subject from the Kirby-21 data set. A subject MPRAGE scan (c) is used with MIMECS to synthesize a T2-w image of the subject (d). The acquired subject b0 image (e) is deformably registered to the subject T1-w image using SyN (with the MI criterion) yielding the corrected image (g). Contours generated from FreeSurfer on the T1-w image (f) are shown on the geometry corrected b0 image (h). The acquired b0 image is deformably registered to the synthetic MIMECS image using SyN (CC criterion) to create a MIMECS corrected image (i). Overlaid contours on this image (j) reveal much better geometry correction.