Table 1:
Different biological data sets used for tests
| Data set | Size: (roughly  characters) |
Obtained from |
|---|---|---|
| D. melanogaster (fruitfly) genome | 165 | ftp://ftp.ensembl.org/pub/release-73/fasta/drosophila_melanogaster/dna/ |
| G. gallus (chicken) genome | 992 | ftp://ftp.ensembl.org/pub/release-73/fasta/gallus_gallus/dna/ |
| UniProtKB/Swiss-Prot protein data set | 193 | http://www.uniprot.org/downloads |
| UniProt fungi proteins data set | 872 | http://www.uniprot.org/uniprot/?query=taxonomy%3a4751&format=* |
| Human chromosome 22 and its copies | 36 to 249 | http://hgdownload.cse.ucsc.edu/goldenPath/hg19/bigZips/ and simulation (see text) |