Table 3.
Accession | Similarity to mRNA of known genes, % | Accession of mRNA of known genes | Qwf ± S.E. | Qomul ± S.E. | R ± S.E. | |
---|---|---|---|---|---|---|
1 | GenBank: GR918015 | Ependymin related protein 1 (Danio rerio), 79 | GenBank: NM_001002416.1 | 3.7 × 10−2 ± 0.4 × 10−2 | 1.5 × 10−2 ± 0.12 × 10−2 | 2.79 ± 0.6 |
2 | GenBank: GR918016 | Similar to netrin-G1 ligand (Macaca mulatta), 78 | GenBank: XM_001090447.1 | 3.9 × 10−4 ± 0.9 × 10−4 | 0.89 × 10−4 ± 0.2 × 10−4 | 4.12 ± 0.8 |
3 | GenBank: GR918017 | Signal transducer/activator of transcription Stat3 (rbtStat3) mRNA (Oncorhynchus mykiss), 97 | GenBank: OMU60333 | 8.2 × 10−4 ± 3.1 × 10−4 | 29.09 × 10−4 ± 5 × 10−4 | 0.33 ± 0.05 |
4 | GenBank: GR918020 | Fibroblast growth factor 12 (Danio rerio), 81 | GenBank: BC124640.1 | 3.1 × 10−2 ± 0.42 × 10−2 | 1.05 × 10−2 ± 0.09 × 10−4 | 2.62 ± 0.6 |
5 | GenBank: GR918021 | Tumor necrosis factor receptor superfamily, member 9 (Pan troglodytes), 89 | GenBank: XM_001157779.1 | 0.61 ± 0.04 | 0.27 ± 0.02 | 2.45 ± 0.6 |
6 | GenBank: GR918018 | DTSsa4 Tc1-like DNA transposon (Salmo salar), 86 | GenBank: EF685957.1 | 4.43 ± 0.41 | 1.3 ± 0.18 | 3.48 ± 0.5 |
7 | GenBank: GR918022 | NADH dehydrogenase subunit 5 (Thymallus thymallus), 85 | GenBank: AF270855 | 8.2 × 10−2 ± 0.9 × 10−2 | 3.5 × 10−2 ± 0.42 × 10−2 | 2.27 ± 0.24 |
8 | GenBank: GR918019 | Na/K ATPase alpha subunit isoform 1c mRNA (Oncorhynchus mykiss), 97 | GenBank: AY319389.1 | 0.86 ± 0.05 | 2.38 ± 0.21 | 0.35 ± 0.03 |
Data represent mean ± S.E. (standard error) of six independent experiments.
Q: the number of transcripts normalized to the number of GAPDH gene transcripts.
R: relative expression~Qwhitefish/Qomul.