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. Author manuscript; available in PMC: 2014 Mar 18.
Published in final edited form as: J Microbiol Methods. 2013 Jan 9;92(3):256–263. doi: 10.1016/j.mimet.2012.12.021

Table 1.

Genetic characterization of environmental isolates evaluated in this study

Isolate ID
(accession no.)
Closest Isolate IDa
(% homology)
DGGE amplicon

GC
content
(%)
Length
(bp)
Phylum
71a (AY177362) Bacillus pumilis (99%) Glacial ice bacterium G500K-16 (99%) 53.6 351 Firmicutes
70-2 (AY177375) β-proteobacterium Wuba68 (96%) Janthinobacterium agaricidamnosum SAFR-022 (96%) 54.1 346 β-Proteobacteria
M22 (AY864081) Ralstonia detusculanense (99.93%)
Ralstonia sp. APF11 (99.93%)
55.0 346 β-Proteobacteria
50 (AY177368) Ralstonia sp. S23 (99%) 56.2 346 β-Proteobacteria
M16 (AY177365) Rhizobia giardinii (99%) Uncultured soil bacteria clone G9-284-4 (99%) 56.5 351 α-Proteobacteria
35 (AY177358) Methylobacterium sp.F18 (96%) 57.0 351 α-Proteobacteria
a

: Closest identification based on similarity to 16S rDNA sequences in the GenBank database using the BLAST algorithm.