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. 2014 Mar;196(5):961–970. doi: 10.1128/JB.01170-13

TABLE 1.

Strains and plasmids used in this study

Strain or plasmid Genotype and/or descriptiona Source or reference
F. johnsoniae strains
    ATCC 17061 strain UW101 Wild type 3, 26
    UW102-3 Spontaneous sprA mutant 19, 62
    UW102-57 Spontaneous gldK mutant 4, 63
    UW102-176 Nitrosoguanidine-induced gldM mutant 4, 19
    UW102-344 Spontaneous gldL mutant 19, 62
    CJ1631A Δ(gldN gldO) 19
    CJ1808 chiA disruption mutant; (Emr) This study
    CJ1827 Strain used for construction of deletion mutants; rpsL2 (Smr) 30
    CJ2325 Mutant lacking CTD-encoding region of chiA; rpsL2 (Smr) This study
    CJ2355 Fjoh_4175 deletion mutant; rpsL2 (Smr) This study
    FJ149 sprE disruption mutant; (Emr) 20
    KDF001 sprT disruption mutant; (Emr) 6
Plasmids
    pCP23 E. coli-F. johnsoniae shuttle plasmid; Apr (Tcr) 64
    pET30a Protein expression vector; Kmr Novagen
    pKF002 pCP23 carrying sprT; Apr (Tcr) 6
    pLYL03 Suicide vector used for insertional mutagenesis; Apr (Emr) 65
    pME-mCherry Plasmid expressing fluorescent protein mCherry; Kmr 66
    pNap2 pCP23 carrying sprE; Apr (Tcr) 20
    pRR51 rpsL-containing suicide vector for construction of deletions; Apr (Emr) 30
    pSAM1 1,299-bp fragment of chiA in pLYL03 for constructing chiA disruption mutant CJ1808; Apr (Emr) This study
    pSN48 pCP23 carrying sprA; Apr (Tcr) 67
    pSSK05 pCP23 carrying chiA; Apr (Tcr) This study
    pSSK07 1,833-bp fragment of chiA inserted into pET30a; Kmr This study
    pSSK26 2,121-bp fragment upstream of chiA CTD-encoding region in pRR51; Apr (Emr) This study
    pSSK27 Construct used to delete CTD-encoding region of chiA; 2,033-bp region downstream of chiA inserted into pSSK26; Apr (Emr) This study
    pSSK30 pCP23 carrying mcherry; Apr (Tcr) This study
    pSSK32 2,118-bp region downstream of Fjoh_4175 inserted into pRR51; Apr (Emr) This study
    pSSK34 Construct used to delete Fjoh_4175; 1,948-bp region upstream of Fjoh_4175 inserted into pSSK32; Apr (Emr) This study
    pSSK45 mcherry with stop codon amplified with primers 862 and 1443 and cloned into pCP23; Apr (Tcr) This study
    pSSK51 484-bp fragment spanning the chiA promoter, start codon, and N-terminal signal peptide-encoding region inserted into pSSK30; Apr (Tcr) This study
    pSSK52 566-bp region encoding 105-amino-acid CTDChiA inserted into pSSK51; Apr (Tcr) This study
    pSSK54 484-bp fragment spanning the chiA promoter, start codon, and N-terminal signal peptide-encoding region inserted into pSSK45; Apr (Tcr) This study
    pTB79 pCP23 carrying gldN; Apr (Tcr) 63
    pTB81a pCP23 carrying gldL; Apr (Tcr) 63
    pTB94a pCP23 carrying gldM; Apr (Tcr) 63
    pTB99 pCP23 carrying gldK; Apr (Tcr) 63
a

Antibiotic resistance phenotypes are as follows: ampicillin, Apr; erythromycin, Emr; kanamycin, Kmr; streptomycin, Smr; and tetracycline, Tcr. The antibiotic resistance phenotypes given in parentheses are those expressed in F. johnsoniae but not in E. coli. The antibiotic resistance phenotypes without parentheses are those expressed in E. coli but not in F. johnsoniae.