TABLE 5.
Bacteria detected on NCs 25, 40, 54, 55, 56, 62, and 63, as determined by 454 pyrosequencing of bacterial DNA
| Phylum or class | Family or genus | No. of OTUsa |
|---|---|---|
| Actinobacteria | Actinomycetaceae | 1 |
| Coriobacteriaceae | 2 | |
| Corynebacteriaceae | 4 | |
| Dermabacteraceae | 1 | |
| Intrasporangiaceae | 1 | |
| Microbacteriaceae | 3 | |
| Micrococcaceae | 3 | |
| Nocardiaceae | 1 | |
| Nocardioidaceae | 4 | |
| Propionibacteriaceae | 2 | |
| Pseudonocardiaceae | 1 | |
| Sanguibacteraceae | 1 | |
| Solirubrobacteraceae | 1 | |
| Bacteroidetes | Bacteroidaceae | 2 |
| Flavobacteriaceae | 1 | |
| Porphyromonadaceae | 1 | |
| Prevotellaceae | 3 | |
| Sphingobacteriaceae | 2 | |
| Firmicutes | Alicyclobacillaceae | 1 |
| Bacillaceae | 1 | |
| Clostridiales family XIII incertae sedis | 3 | |
| Enterococcaceae | 4 | |
| Eubacteriaceae | 1 | |
| Lachnospiraceae | 9 | |
| Lactobacillaceae | 5 | |
| Paenibacillaceae | 1 | |
| Ruminococcaceae | 3 | |
| Staphylococcaceae | 4 | |
| Streptococcaceae | 4 | |
| Veillonellaceae | 4 | |
| Fusobacteria | Fusobacteriaceae | 1 |
| Gemmatimonadetes | Gemmatimonadaceae | 2 |
| Alphaproteobacteria | Bradyrhizobiaceae | 1 |
| Brucellaceae | 1 | |
| Caulobacteraceae | 3 | |
| Rhizobiaceae | 1 | |
| Rhodobacteraceae | 2 | |
| Sphingomonadaceae | 6 | |
| Betaproteobacteria | Alcaligenaceae | 1 |
| Aquabacterium | 1 | |
| Comamonadaceae | 5 | |
| Neisseriaceae | 1 | |
| Oxalobacteraceae | 3 | |
| Gammaproteobacteria | Enterobacteriaceae | 4 |
| Moraxellaceae | 3 | |
| Pseudomonadaceae | 4 | |
| Xanthomonadaceae | 3 | |
| Synergistetes | Dethiosulfovibrionaceae | 1 |
| Tenericutes | Erysipelotrichaceae | 3 |
| Verrucomicrobia | Verrucomicrobiaceae | 1 |
a
OTU, operational taxonomic unit.