TABLE 1.
Primer | Nucleotide sequence (5′ to 3′)a | Amplicon size (bp) | Use | Reference |
---|---|---|---|---|
O1-rfb | GCGTAAATATCTAAACGATTGCATTG, AAACTCAGTTTCGAAGCGATCAA | 83 | Real-time PCR | 13 |
ctxB | GCCGGGTTGTGGGAATGCTCCAAG, CATGCGATTGCCGCAATTAGTATGGC | 536 | PCR, sequencing | 16 |
rstRET | GAGCTAAAATACAGCAACCAATGC, ACTCACCTTGTATTCG | 487 | PCR | 17 |
rstRC | TATTGGGATTGTAAACAGCTGTCC, ACTCACCTTGTATTCG | 480 | PCR | 18 |
tcpA 72F | CACGATAAGAAAACCGGTCAAGAG | 19 | ||
tcpA 477R | CGAAAGCACCTTCTTTCACGTTG | 451 (El Tor) | PCR | 19 |
tcpA 647R | TTACCAAATGCAACGCCGAATG | 620 (classical) | PCR | 19 |
rtxC | CGACGAAGATCATTGACGAC, CATCGTCGTTATGTGGTTGC | 265 | PCR | 4 |
In entries with two sequences, the sequence for the reverse primer follows that for the forward primer.