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. 2014 Mar 18;9(3):e92039. doi: 10.1371/journal.pone.0092039

Table 1. List of the ENS-1 like sequences and homology with the 3807 peptide.

Sequence Position of the gene Protein Size AA Promoter
Name Chrom. Start End Amino Acids (AA) kDa (1) Identity (2) activity (3)
Seq.12 chr1 153080201 153086086 490 54 16/16 Y
Seq.7 chr1 105099609 105104886 490 54 16/16 Y
Seq.32 chr2 95636316 95642444 488 54 16/16 Y
Seq.62 chrUn_ran. 23794802 23799438 487 54 16/16 Y
Seq.10 chr1 146896807 146900813 490 54 16/16 No
Seq.31 chr2 95607871 95610941 427 47 16/16 Y
Seq.38 chr4 29062470 29069620 392 43 16/16 Y
Seq.41 chr5 56151532 56156408 475 52 16/16 Y
Seq.46 chr9 3145510 3148390 627 69 16/16 Y
Seq.52 chrUn_ran. 14717478 14720393 307 34 16/16 Y
Seq.30 (ENS-3) chr2 72991670 73001955 698 77 16/16 Y
Seq.18 chr1 166123942 166128607 490 54 15/16 Y
Seq.2 chr1 49392030 49395290 490 54 15/16 No
Seq.69 chrUn_ran. 48116551 48120222 265 29 15/16 Y
Seq.54 chrUn_ran. 18990010 18992568 160 18 15/16 Y
Seq.15 chr1 164856462 164859682 213 23 N/A Y
Seq.34 chr2 138621760 138623256 210 23 N/A Y
Seq.26 chr2 36219087 36223257 378 42 N/A Y
Seq.24 chr2 11703874 11708540 293 32 N/A Y
Seq.40 chr5 3991240 3997526 182 20 N/A Y
Seq.8 chr1 134745214 134749487 182 20 N/A Y
Seq.22 chr12 18117921 18121939 182 20 N/A Y
Seq.35 chr3 92605110 92611133 182 20 N/A Y
Seq.20 chr1 167194063 167197535 182 20 N/A No
Seq.3 chr1 49395084 49396779 <10 N/A N/A Y

Among 78 copies detected in the chicken genome, 25 were very conserved compared to the reference sequence and are listed below. ORF Finder was used to determine the presence of ORF and to retrieve the subsequent protein sequence. Identity with the 3807 peptide (16 amino acids) defined three categories: total identity (16/16 AA), partial identity (15/16 AA) or no identity (N/A).

(1) The molecular weight of the protein was calculated with the formula: AA number X 110/1000.

In bold are indicated the protein sizes detected in CES cell lysates with the 3807 antibody in western-blotting.

(2) Identity between the ENS-1 like protein sequences and the 3807 peptide (DRIRVLQNEARTRAGK)

(3) Potential activity based on the presence (Y) or the absence (No) of the Nanog, Gata and Ets transcription factors binding sites controling promoter activity.