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. 2014 Feb 18;15(2):2794–2810. doi: 10.3390/ijms15022794

Figure 4.

Figure 4.

(a) Binding free energies calculated for 2000 snapshots extracted at 40 ps intervals from the whole MD simulations for apo-14-3-3σ and bound 14-3-3σ; (b) Decomposition of energy on a per-residue basis into contributions from van der Waals energy (EvdW), sum of electrostatic energies and polar component of solvation free energy (Eele + Gpol) and the non-polar (Gnonpol) component of solvation free energy for residues of apo-14-3-3σ, as well as (c) for bound 14-3-3σ; (d) Comparison between the hydrophobic interactions for per residue in apo-14-3-3σ and bound 14-3-3σ.