Table 4. Relative Populations of Different Regions (g–, t, and g+) in the χ1 Distribution for Amino Acids Obtained from the Experimental Protein Structures (Dunbrack Library) and GBEMP Simulations of Dipeptides.
g– |
t |
g+ |
||||
---|---|---|---|---|---|---|
amino acid | experiment | GBEMP | experiment | GBEMP | experiment | GBEMP |
Arg | 0.087 | 0.177 | 0.338 | 0.329 | 0.575 | 0.494 |
Asn | 0.148 | 0.099 | 0.299 | 0.294 | 0.553 | 0.607 |
Asp | 0.164 | 0.087 | 0.332 | 0.357 | 0.504 | 0.556 |
Cys | 0.171 | 0.231 | 0.264 | 0.302 | 0.565 | 0.467 |
Gln | 0.071 | 0.061 | 0.312 | 0.395 | 0.617 | 0.544 |
Glu | 0.080 | 0.246 | 0.336 | 0.250 | 0.584 | 0.504 |
His | 0.125 | 0.093 | 0.350 | 0.254 | 0.524 | 0.652 |
Ile | 0.123 | 0.057 | 0.086 | 0.135 | 0.791 | 0.807 |
Leu | 0.013 | 0.082 | 0.332 | 0.215 | 0.655 | 0.703 |
Lys | 0.069 | 0.056 | 0.344 | 0.453 | 0.587 | 0.490 |
Met | 0.070 | 0.163 | 0.291 | 0.190 | 0.638 | 0.647 |
Phe | 0.118 | 0.057 | 0.341 | 0.426 | 0.541 | 0.517 |
Ser | 0.463 | 0.615 | 0.243 | 0.165 | 0.294 | 0.220 |
Thr | 0.468 | 0.529 | 0.078 | 0.143 | 0.454 | 0.328 |
Trp | 0.156 | 0.154 | 0.340 | 0.342 | 0.504 | 0.504 |
Tyr | 0.123 | 0.203 | 0.346 | 0.317 | 0.531 | 0.480 |
Val | 0.093 | 0.171 | 0.333 | 0.210 | 0.574 | 0.619 |