Table 4. RNA Expression of protein coding genes in the Deschampsia antarctica chloroplast genome.
locus ID | gene name | locus | FPKM | locus ID | gene name | locus | FPKM |
DeanCp027 | ndhC | 48846–49209 | 87311 | DeanCp032 | accD | 56279–56411 | 326 |
DeanCp037 | psbJ | 60890–61013 | 19529 | DeanCp073 | rps15 | 100781–101054 | 314 |
DeanCp064 | rps19 | 79951–80233 | 13440 | DeanCp076 | rpl32 | 104531–104714 | 309 |
DeanCp043 | psaJ | 64095–64224 | 10915 | DeanCp025 | ndhJ | 47535–48015 | 288 |
DeanCp002 | psbA | 83–1145 | 10274 | DeanCp016 | atpI | 30197–30941 | 283 |
DeanCp042 | petG | 63234–63348 | 9557 | DeanCp074 | ndhH | 101191–101431 | 254 |
DeanCp051 | psbN | 70154–70286 | 7916 | DeanCp004 | rps16 | 4488–5567 | 250 |
DeanCp011 | petN | 17020–17110 | 7370 | DeanCp080 | ndhE | 109031–109337 | 202 |
DeanCp018 | atpF | 32063–33432 | 6499 | DeanCp036 | petA | 59093–60056 | 188 |
DeanCp039 | psbF | 61282–61402 | 6371 | DeanCp065 | rpl2 | 80495–81980 | 185 |
DeanCp038 | psbL | 61143–61260 | 4812 | DeanCp069 | ndhB | 85606–87851 | 165 |
DeanCp010 | psbM | 16638–16743 | 3750 | DeanCp070 | rps7 | 88150–88621 | 159 |
DeanCp006 | psbI | 7354–7465 | 3335 | DeanCp060 | rpl14 | 76697–77069 | 152 |
DeanCp050 | psbT | 69989–70106 | 3089 | DeanCp023 | ycf3 | 41199–43189 | 152 |
DeanCp040 | psbE | 61412–61664 | 3020 | DeanCp068 | ycf15 | 83879–84167 | 149 |
DeanCp052 | psbH | 70389–70611 | 2998 | DeanCp045 | rps18 | 65145–65658 | 144 |
DeanCp020 | rps14 | 35628–35940 | 2224 | DeanCp058 | infA | 75691–76042 | 144 |
DeanCp017 | atpH | 31349–31595 | 2138 | DeanCp046 | rpl20 | 65815–66175 | 144 |
DeanCp005 | psbK | 6761–6947 | 1970 | DeanCp024 | rps4 | 44159–44765 | 142 |
DeanCp009 | psbZ | 11675–11864 | 1948 | DeanCp048 | clpP | 67131–67782 | 141 |
DeanCp030 | rbcL | 53858–55292 | 1782 | DeanCp081 | ndhG | 109549–110080 | 136 |
DeanCp007 | psbD | 8635–9697 | 1333 | DeanCp034 | ycf4 | 57149–57707 | 134 |
DeanCp033 | psaI | 56726–56837 | 1308 | DeanCp003 | matK | 1685–3221 | 133 |
DeanCp041 | petL | 62963–63059 | 1282 | DeanCp061 | rpl16 | 77186–78490 | 132 |
DeanCp049 | psbB | 68293–69820 | 1197 | DeanCp059 | rps8 | 76143–76554 | 128 |
DeanCp071 | ycf68 | 93397–93832 | 1096 | DeanCp063 | rpl22 | 79429–79873 | 113 |
DeanCp079 | psaC | 108276–108522 | 1052 | DeanCp035 | cemA | 58162–58861 | 110 |
DeanCp019 | atpA | 33523–35047 | 971 | DeanCp075 | ndhF | 101464–103684 | 102 |
DeanCp054 | petD | 72341–73561 | 956 | DeanCp077 | ccsA | 105547–106507 | 87 |
DeanCp057 | rpl36 | 75472–75586 | 956 | DeanCp082 | ndhI | 110198–110741 | 85 |
DeanCp044 | rpl33 | 64666–64867 | 922 | DeanCp055 | rpoA | 73770–74796 | 74 |
DeanCp001 | rps12 | 66870–89475 | 840 | DeanCp014 | rpoC2 | 24536–28943 | 66 |
DeanCp021 | psaB | 36086–38291 | 676 | DeanCp015 | rps2 | 29236–29947 | 62 |
DeanCp022 | psaA | 38316–40569 | 558 | DeanCp083 | ndhA | 110838–112939 | 58 |
DeanCp008 | psbC | 9644–11066 | 513 | DeanCp078 | ndhD | 106654–108157 | 57 |
DeanCp084 | ndhH | 112940–114122 | 510 | DeanCp072 | ycf1 | 99622–100414 | 52 |
DeanCp053 | petB | 70745–72153 | 495 | DeanCp056 | rps11 | 74860–75292 | 48 |
DeanCp031 | rpl23 | 55577–55853 | 419 | DeanCp062 | rps3 | 78636–79356 | 44 |
DeanCp047 | rps12 | 125837–126080 | 402 | DeanCp067 | ycf2 | 82674–83874 | 39 |
DeanCp066 | rpl23 | 81998–82280 | 400 | DeanCp090 | ycf2 | 131435–132638 | 39 |
DeanCp029 | atpB | 51509–53006 | 385 | DeanCp013 | rpoC1 | 22302–24333 | 31 |
DeanCp026 | ndhK | 48118–48856 | 342 | DeanCp012 | rpoB | 19034–22265 | 29 |
DeanCp028 | atpE | 51099–51513 | 329 |