Table 6. Distribution of small RNAs in the chloroplast genome of Deschampsia antarctica.

Loca-tion	start	end	F/R*	core sequence	length			reads number	At	Os	Hv
psbA5′ end	1229	1209	R	AACAAGCCTTCTATTATCTA		20	36		+
trnK-rps16	4378	4356	R	TGTCGTGCCAATCCAACATAAGCC		23	819			+	+
psbI-psbD	8129	8150	F	TTCCTTAGACTTAGACCGCGC		21	1200
trnG-trnfM	12314	12333	F	ACCGTATCCCTTACTATTCT		20	1056
trnT3′ end	14786	14806	F	GGTTCAAATCCGATAAAGGGC		21	148
rpoB CDS	21313	21332	F	CGTCGTATATCGCGGAAGCT		20	166
rpoC2-rps2	29130	29147	F	ATTTCAAGCTATTTCGGA		18	20314				+
atpH5′ end	31305	31325	F	ATTGTATCCTTAACCATTTCT		21	34100		+	+	+
atpA CDS	34274	34297	F	TTATGTACCGCGAACGGCATA		21	1558
psaB5′ end	38291	38315	R	AGGAGGATTTGAAAGGCATTA		21	1224
ycf33′ end	41108	41088	R	TTCATTATATCGCTTTCTTCT		21	7428				+
ycf35′ end	43251	43232	R	TTTGTTTTTATGTTATTTTG		20	450		+		+
trnF-ndhJ	47285	47265	R	CTTTGTATCGCGCGCATGACT		21	102512
rbcL3′ end_1	55406	55426	F	CTCGGCTCAATCTTTTTTAGA		21	111		+	+
rbcL3′ end_2	55424	55431	F	AAAAAAAAGATTGAGCCGAAT		21	160		+	+
psaI-ycf4	57004	57024	F	TGAATAGAAAGTCAATGTATC		21	120
petA CDS	59574	59553	R	TTTCACTATATTTCTTACCGGG		22	230
trnP5′ end	63758	63739	R	AGGGATGTAGCGCAGCTTGG		20	2740
psbH-petB	70702	70721	F	GGTAGTTCGACCGCGGAATT		20	11965		+	+	+
petD-rpoA	73658	73677	F	TTATTATGATCCATTTCGCG		20	130600			+	+
rps19 CDS	80081	80098	F	ATGAATCGCGATTGTATG		18	2770
ndhB5′ end 1	87859 (127454)	87839 (127474)	R	ACTAATTCATGATCTGGCATG		21	7196		+	+	+
ndhB5′ end 2	87863 (127450)	87843 (127470)	R	AGTTACTAATTCATGATCTGG		21	5203		+	+	+
rrn163′ end	92921 (122393)	92941 (122373)	F	GGTGCGGCTGGATCACCTCCT		21	4056
trnA intron	95093 (120221)	95113(120201)	F	CTTAGCGGATACTATGATAGC		21	982
trnR3′ end	98927 (116387)	98946 (116368)	F	GTGTCGGGGGTTCGAATCCC		20	19903			+
ndhF CDS	101690	101709	F	ATAACCGCGATTATATGACC		20	1149

*F/R: Direction of transcripts (F: forward, R: reverse).