Table 1. Oligonucleotide primers used for RT-PCR amplification of MDV and H3N2 viruses.
Oligo ID | Gene | Nucleotide region | Direction | Sequence 5′ ->3′ |
NA-1246F | NA | 1246–1268 | Forward | AGCTGCATCAATMGGTGCTTTTA |
NA-1334R | NA | 1334–1353 | Reverse | Biotin-ACCTGARGTGCCACAAAACA |
NS-354F | NS | 354–372 | Forward | AATGGACCAGGCAATCATG |
NS-458R | NS | 436–458 | Reverse | Biotin-TCTTCGGTGAAAGCCCTTAGTAA |
M-787F | M | 787–805 | Forward | TGGGATCTTGCACTTGATA |
M-873R | M | 854–873 | Reverse | Biotin-TCTTTTMAGRCCGTGTTT |
PB1-38F | PB1 | 38–56 | Forward | Biotin-CAGCGCAAAATGCCATAAG |
PB1-219R | PB1 | 196–219 | Reverse | TAGTGGTCCATCAATTGGGTTRAG |
PB2-120F | PB2 | 120–143 | Forward | AAAGAACCCGTCACTTAGGATGAA |
PB2-308R | PB2 | 285–308 | Reverse | Biotin-CCATTYCTATTCCACCATGTYACA |
PA-66F | PA | 66–88 | Forward | AGAGTATGGRGAGGATCYGAAAA |
PA-328R | PA | 308–328 | Reverse | Biotin-ACAAATCYGGYAGAAACTTCG |
NP-36F | NP | 36–56 | Forward | Biotin-GATGGAAACTGATGGGGAWCG |
NP-140R | NP | 118–140 | Reverse | AGTTCRGTGCACATTTGGATGTA |