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. 2014 Mar 19;9(3):e92580. doi: 10.1371/journal.pone.0092580

Table 2. Oligonucleotide primers used for RT-PCR amplification of MDV and H7N9 viruses.

Oligo ID Gene Nucleotide region Direction Sequence 5′ ->3′
NA-Len-UTR-F NA 1–19 (5′ UTR) Forward AGCAAAAGCAGGAGTGAAA
NA-N9-UTR-F NA 1–18 (5′ UTR) Forward AGCAAAAGCAGGGTCAAG
NA-H7N9-374R NA 353–374 Reverse Biotin-TCGCATGAMACATAAGRTTCTC
M-H7N9-787F M 787–805 Forward TGGGATMTTGCACTTGATA
M-H7N9-873R M 854–873 Reverse Biotin- CCTCTTTTCARACCGTRTTT
NS-H7N9-43F NS 43–61 Forward Biotin-CTTTGGCATGTCCGCAAAC
NS-H7N9-124R NS 105–124 Reverse ACTTCTGATCTCGGCGAAGC
NP-H7N9-1269F NP 1269–1286 Forward AACCATYATGGCAGCATT
NP-H7N9-1352R NP 1333–1352 Reverse Biotin-GCACYTTCCATCATYCTTAT
PA-H7N9-526F PA 526–548 Forward Biotin-TTCACCATAAGRCARGAAATGGC
PA-H7N9-600R PA 581–600 Reverse TGTTTCTTCGCCTCTTTCRG
PB1-H7N9-211F PB1 211–233 Forward Biotin-GGACCAYTACCTGAGGACAAYGA
PB1-H7N9-293R PB1 271–293 Reverse GATTCTTCAAGGAAAGCCATTGC
PB2-H7N9-27F PB2 27–49 Forward Biotin-TYTGATGTCRCAGTCTCGCACTC
PB2-H7N9-160R PB2 140–160 Reverse TCATTGCCATCATCCAYTTCA