Table 2. Predicted novel mouse and bovine miRNA.

miRNome	Name	Sequence with predicted seed	Read counts	miRDeep2 score	Example miRBase miRNA with the same seed
Mouse	mmu-3_28325-3p	AUCACAUUGACAGGGAUUUU	1,165	3.5	mmu-miR-23a-3p
	mmu-11_6623-3p	UGGUGGGUGCAUAUGUUUU	3,204	5.1	aly-miR294a-3p
Bovine	bta-5_32567-5p	AAAGGGGAAAGGUGCUUUUG	7,442	3.5	cin-miR-4005b-3p
	bta-10_2736-3p	GUGGGACGCGUGCGUUUU	7,790	1.2	gga-miR-1670
	bta-16_10094-5p	AAAAAGUUCGUUCAGGUUUUU	2,047	4.2	bta-miR-2284j
	bta-16_10667-5p	CAUUGGUGGUUCAGUGGU	1,628	4.8	zma-miR171c-5p
AGO2	mmu-2_24638-5p	UCCUCGUUAGUAUAGUGGUGAGU	727	1.1	nve-miR-2033-3p
	mmu-3_28325-3p	AUCACAUUGACAGGGAUUUU	2,054	3.5	mmu-miR-23a-3p

In bold type: seed.