Skip to main content
. 2014 Mar 21;9(3):e91941. doi: 10.1371/journal.pone.0091941

Table 2. Number of genes containing GH domains in different metagenomes.

Macropoda Termiteb Bovinec Pandad chicken
Cellulases
GH5 10 56 1451 3 151
GH6 0 0 0 0 0
GH7 0 0 1 0 0
GH9 0 9 795 0 14
GH44 0 6 ? 0 41
GH45 0 4 115 0 0
GH48 0 0 0 0 0
Total 10(2) 74(11) 2365(9) 3(1) 206(2)
Endohemicellulases
GH8 1 5 329 2 21
GH10 11 46 1025 2 60
GH11 0 14 165 0 0
GH12 0 0 0 0 0
GH26 5 15 369 0 18
GH28 2 6 472 1 93
GH53 9 12 ? 0 21
Total 28(5) 98(14) 2360(9) 13(3) 213(2)
Debranching Enzymes
GH51 12 18 ? 5 84
GH54 0 0 ? 0 0
GH62 0 0 1 0 0
GH67 5 10 120 2 12
GH78 25 0 1260 2 425
Total 42(8) 18(3) 1381(5) 9(2) 521(5)
Oligosaccharide-degrading enzymes
GH1 61 22 253 101 263
GH2 24 23 1436 1 998
GH3 72 69 2844 18 1275
GH29 2 0 939 1 232
GH35 3 3 158 4 54
GH38 3 11 272 10 73
GH39 1 3 315 9 45
GH42 8 24 374 18 367
GH43 10 16 ? 0 340
GH52 0 3 0 0 0
Total 184(33) 174(24) 6591(23) 162(36) 3647(38)
Sum 557 704 27755 448 9033
CDS 78896 82789 2547270 49844 595178
%GH 0.71 0.85 1.09 0.90 1.52

Data are grouped according to Allgier et al [68]. The numbers in parenthesis are relative to total number of GH containing genes. The data is take from awallaby [55] btermite [44], cpanda [69] and dbovine rumen [70].