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. Author manuscript; available in PMC: 2014 Mar 24.
Published in final edited form as: J Neurovirol. 2013 Aug 27;19(5):471–478. doi: 10.1007/s13365-013-0200-z

Table 1.

Effects of polymorphisms in YWHAE on neurocognitive testing

HIV-seronegative p HIV-seropositive p
rs4790084(rs1204828) rs4790084(rs1204828)
G/G(C/C) A/G_A(T/C_T) G/G(C/C) A/G_A(T/C_T)
N 5 11 10 10
Age 37.2 ± 4.1 43.3 ± 2.8 0.14 42.8 ± 2.6 41.5 ± 4.1 0.58
Education (years) 13.2 ± 0.6 13.6 ± 0.8 0.56 13.0 ± 1.0 12.8 ± 0.3 0.74
Cognitive Status
 Normal 70% 10% 0.006
 Impaired 30% 90%
HIV RNA viral load
 log10 copies/ml
  CSF (n) 2.0 ± 0.2 (8) 1.7 ± 0.02 (10) 0.28
  Plasma (n) 2.8 ± 0.3 (10) 1.8 ± 0.03 (10) 0.03
CD4 (cells/mm3) 595 ± 101 781 ± 126 0.31
CD4 nadir (cells/mm3) 354 ± 81 562 ± 118 0.21
Treatment
 Naïve (n) 20% (2) 28.6% (2)
 % ART (n) 0% (0) 14.3% (1)
 % HAART (n) 80% (8) 57.1% (6)
CPE (n) 9.6 ± 0.8 (8) 7.0 ± 1.4 (8) 0.32
YWHAE in CSF1 16.8± 4.0 (9) 5.5 ± 0.9 (8) 0.02
pan-14-3-3 in CSF1 15.1 ± 3.6 (9) 11.3 ± 2.9 (7) 0.45
BDI 8.8 ± 4.5 7.1 ± 2.6 0.70 6.3 ± 1.4 12.9 ± 4.2 0.08
I. NPZ2 0.3 ± 0.2 0.3 ± 0.1 0.42 0.4 ± 0.2 − 0.1 ± 0.1 0.02
II. Neuropsychological domains/subtests
1. Frontal Executive2 0.3 ± 0.5 0.1 ± 0.3 0.07 0.3 ± 0.2 −0.1 ± 0.3 0.02
2. Psychomotor Speed2 0.3 ± 0.1 0.2 ± 0.2 0.95 0.1 ± 0.2 −0.3 ± 0.2 0.20
3. Verbal Memory2 0.1 ± 0.1 0.3 ± 0.2 0.87 0.6 ± 0.2 0.3 ± 0.2 0.64
4. Motor Speed2 0.4 ± 0.2 0.6 ± 0.2 0.87 0.7 ± 0.4 −0.3 ± 0.3 0.08

Mean ± SEM, Mann-Whitney U-test, significant difference p<0.05 in bold

2

z-scores

3

Mean optical density of western blot expression

CSF = cerebral spinal fluid

RNA = ribonucleic acid

CPE = Central nervous system penetration index

NPZ = Overall neurological performance z-score

BDI = Beck Depression Inventory