Table 1. CUL3 and KLHL3 variants segregating with the FHHt phenotype in each pedigree.
The zygosity of affected individuals within each pedigree for the causative variant is shown. Conservation describes the KLHL3 amino acid residues conserved across species expressed as the proportion of species sharing the same reference allele in primates (P), mammals (M) and vertebrates (V) (Ensemble KLHL3 paralogues; available at http://www.ensembl.org/Homo_sapiens/Gene/Compara_Ortholog?g=ENSG00000146021;r=5:136953189-137071779). The country of origin of each pedigree is also shown. Variants are described according to Human Genome Variation Society (HGVS) standard nomenclature using the reference sequences listed in Supplementary Table S2 (at http://www.clinsci.org/cs/126/cs1260721add.htm). *Previously undescribed variants; **previously undescribed genotype.
| Pedigree | Gene | Genomic DNA position | HGVS coding DNA position | Zygosity | rs_identity | Protein effect | Conservation | Country of origin |
|---|---|---|---|---|---|---|---|---|
| 1* | CUL3 | Chr2:225368368 | c.1377+1G>T | Heterozygous | – | Exon 9/intron 9 splicing | – | U.K. |
| 2 | CUL3 | Chr2:225368368 | c.1377+1G>C | Heterozygous | rs199469660 | Exon 9/intron 9 splicing | – | Australia |
| 3* | CUL3 | Chr2:225368551 | c.1207–12T>A | Heterozygous | – | Exon 9/intron 8 splicing | – | Australia |
| 4 | CUL3 | Chr2:225368540 | c.1207–1G>A | Heterozygous | rs199469654 | Exon 9/intron 8 splicing | – | U.K. |
| 5** | KLHL3 | Chr5:136964078 | c.1499G>T | Homozygous | – | G500V | P (9/9), M (37/37), V (49/50) | U.K. |
| 6/7/8 | KLHL3 | Chr5:136974701 | c.1160T>C | Heterozygous | rs199469630 | L387P | P (9/9), M 33/33), V (46/46) | Australia |
| 9 | KLHL3 | Chr5:136975551 | c.1019C>T | Heterozygous | rs199469628 | A340V | P (9/9), M 30/31), V (43/44) | Australia |
| 10 | KLHL3 | Chr5:136964097 | c.1480G>A | Heterozygous | rs199469633 | A494T | P (9/9), M 36/36), | U.K. |