Figure 2.

Comparative Analysis of Genes Differentially Expressed between ABP1-Inactivated and Control Dark-Grown Seedlings after Short- and Long-Term Ethanol Induction.

Ethanol induction results in ABP1 inactivation in SS12K and expression of GUS reporter in the control line

(A) Venn diagram representing the number of overlapping and unique upregulated (left) and downregulated (right) genes after 8 and 96 h of ethanol induction promoting scFv12 expression and resulting inactivation of ABP1. Differentially expressed genes are also compared with cell wall annotated genes (gray circle) in TAIR10 implemented by cell wall genes expressed in dark-grown hypocotyl listed by Jamet et al. (2009).

(B) Histograms illustrating the overrepresentation of cell wall–related genes after inactivation of ABP1. The data take into account normalization to the total number of cell wall genes present on the chip.

(C) Major classes of cell wall genes differentially expressed after short- and long-term inactivation of ABP1.