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. 2014 Feb 7;127(4):763–780. doi: 10.1007/s00122-014-2268-0

Table 1.

Extraction and detection methods for S. endobioticum

Method Citation
Separation of sporangia from soil particles based on different specific gravity in chloroform Glynne (1926), Pratt (1974, 1976a), Hampson and Thompson (1977), Hampson and Robertson (1995)
Wet sieving using electromagnetic shaker aided by chloroform floatation Hampson and Coombes (1996)
Soil extraction with the non ionic detergent Triton X100 Laidlaw (1985)
Substitution of chloroform by dibromomethane and oil, use of fluoric acid for sand removal Nelson and Olsen (1964)
Extraction in water and sedimentation using sodium sulfate Marcus (1969), Mygind (1954; 1961)
Extraction with potassium iodide from air dried soil after sieving Putnam and Sindermann (1994)
Density gradients with potassium/sodium salt on air dried soil after sieving Zeyla and Melnik (1998)
Extraction with chloroform, calcium chloride and zinc sulfate van Leeuwen et al. (2005)
Zonal centrifugation Wander et al. (2007)
Microscopic examination National Diagnostic Protocol (2011)
Polymerase chain reaction (PCR) using species-specific primers Niepold and Stachewicz (2004), Van den Boogert et al. (2005), van Gent-Pelzer et al. (2010)
Microarray-based hybridization Abdullahi et al. (2005)