Table 1.
Organisms currently in the network portal
| Organism | Domain: phylum | Number of genes | Number of gene-expression comparisons | Gene-expression data source | Number of regulators |
|---|---|---|---|---|---|
| Halobacterium sp. NRC-1 | Archaea: Euryarchaeota | 2701 | 1661 | (23,36) | 125 |
| Methanococcus maripaludis S2 | Archaea: Euryarchaeota | 1863 | 58 | (38) | 57 |
| Bacteroides thetaiotaomicron VIP-5482 | Bacteria: Bacteroidetes | 4902 | 324 | MicrobesOnline | 263 |
| Clostridium acetobutylicum ATCC 824 | Bacteria: Firmicutes | 3995 | 111 | MicrobesOnline | 259 |
| Bacillus cereus ATCC 14579 | Bacteria: Firmicutes | 5501 | 151 | MicrobesOnline | 376 |
| Bacillus subtilis subsp. subtilis str. 168 | Bacteria: Firmicutes | 4313 | 138 | MicrobesOnline | 319 |
| Synechococcus elongatus PCC 7942 | Bacteria: Cyanobacteria | 2717 | 129 | GEO | 90 |
| Rhodobacter sphaeroides 2.4.1 | Bacteria: Proteobacteria | 4341 | 165 | MicrobesOnline | 231 |
| Pseudomonas aeruginosa PAO1 | Bacteria: Proteobacteria | 5646 | 635 | MicrobesOnline | 475 |
| Escherichia coli K-12 | Bacteria: Proteobacteria | 4497 | 868 | (35) | 310 |
| Campylobacter jejuni subsp. jejuni | Bacteria: Proteobacteria | 1711 | 114 | MicrobesOnline | 39 |
| Geobacter sulfurreducens PCA | Bacteria: Proteobacteria | 3519 | 87 | MicrobesOnline | 156 |
| Desulfovibrio vulgaris str. Hildenborough | Bacteria: Proteobacteria | 3661 | 383 | MicrobesOnline | 128 |