Table 1.

DENV and WNV reference sequences

	DENV				WNV
Nucleotide	NC_001477	NC_001474	NC_001475	NC_002640	NC_009942	NC_001563
Polyprotein	NP_059433	NP_056776	YP_001621843	NP_073286	YP_001527877	NP_041724
Anchored capsid (C) protein	NP_722457	NP_739581	YP_001531165	NP_740314	YP_005097850	NP_776011
Membrane (prM) glycoprotein precursor	NP_733807	NP_739582	YP_001531166	NP_740315	YP_001527879	NP_776012
Envelope (E) protein	NP_722460	NP_739583	YP_001531168	NP_740317	YP_001527880	NP_776014
Non-structural (NS1) protein 1	NP_722461	NP_739584	YP_001531169	NP_740318	YP_001527881	NP_776015
Non-structural (NS2A) protein 2A	NP_733808	NP_739585	YP_001531170	NP_740319	YP_001527882	NP_776016
Non-structural (NS2B) protein 2B	NP_733809	NP_739586	YP_001531171	NP_740320	YP_001527883	NP_776017
Non-structural (NS3) protein 3	NP_722463	NP_739587	YP_001531172	NP_740321	YP_001527884	NP_776018
Non-structural (NS4A) protein 4A	NP_733810	NP_739588	YP_001531173	NP_740322	YP_001527885	NP_776019
2K protein	NP_722467	NP_739593	YP_001531174	NP_740323	YP_001527885	NP_776020
Non-structural (NS4B) protein 4B	NP_733811	NP_739589	YP_001531175	NP_740324	YP_001527886	NP_776021
Non-structural (NS5) protein 5	NP_722465	NP_739590	YP_001531176	NP_740325	YP_001527887	NP_776022

Accessions for nucleotide and protein sequences used in the Virus Variation annotation pipeline are shown. The protein names used on the Virus Variation search pages are shown within parentheses.