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. 2014 Mar 25;9(3):e92777. doi: 10.1371/journal.pone.0092777

Table 1. Orthoreoviruses and accession numbers used in the present study.

Reovirus and strain Accession No.
Sigma C protein (S1-segment, region used for phylogenetic analyses) Major inner capsid protein (S2-segment, region used for phylogenetic analyses) Sigma NS protein (S3-segment, region used for phylogenetic analyses) Major outer capsid protein (S4-segment, region used for phylogenetic analyses)
Miyazaki-Bali/2007 AB521793 (550–1545) AB521794* (1–1241) AB521795 (4–1107) AB521796* (9–1094)
Mammalian 1 strain Lang L19774 (19–1275) M13139 (33–1104)
Mammalian 2 strain D5/Jones M10261 (14–1213) L19775 (19–1275) X60066 (33–1104)
Mammalian 3 strain Dearing HM159619 (13–1380) L19776 (19–1275) HM159621 (28–1128) K02739 (33–1112)
Mammalian 4 strain Ndelle AF368035 (71–1387) AF368036 (19–1275) AF368037 (33–1104)
Avian strain 176 AF218358 (630–1610) AF059716 (16–1266) AF059724 (24–1127) af059720 (31–1134)
Avian strain 138 AF218359 (630–1610) AF059717 (16–1266) AF059725 (24–1127) AF059721 (31–1134)
Muscovy duck strain 89026 AJ310525 (1–810) AJ278102 (16–1266) AJ133122 (24–1127) AJ006476 (31–1134)
HK23629/07 EU165526 (529–1501) EU170365 (1–1178) EU170366 (1–1046) EU170367 (9–1078)
HK46886/09 JF803294 (529–1501) JF803296 (1–1178) JF803298 (1–1046) JF803300 (9–1078)
HK50842/10 JF803295 (529–1501) JF803297 (1–1178) JF803299 (1–1046) JF803301 (9–1078)
Kampar EU448334 (527–1567) EU448335 (16–1266) EU448336 (29–1132) EU44833 (30–1115)
Melaka EF026043 (584–1570) EF026044 (16–1266) EF026045 (29–1132) EF026046 (30–1115)
Nelson Bay AF218360 (611–1582) AF059718 (16–1266) AF059726 (29–1132) AF059722 (31–1116)
Pulau AY357730 (582–1565) AY357731 (16–1266) AY357732 (29–1132) AY357733 (31–1116)
Sikamat/MYS/2010 JF811580 (570–1568) JF811581 (16–1266) JF811582 (29–1132) JF811583 (30–1115)
Xi river GU188274 (611–1582) GU188275 (29–1132)
Baboon AF059719 (17–1258) AF059727 (23–1084) AF059723 (31–1221)
Reptilian AY238886 (32–1195)

*: When deposited, the virus was named “Miyazaki.” In the present study, it is named “Miyazaki-Bali/2007.”