Table 1. Orthoreoviruses and accession numbers used in the present study.
Reovirus and strain | Accession No. | |||
Sigma C protein (S1-segment, region used for phylogenetic analyses) | Major inner capsid protein (S2-segment, region used for phylogenetic analyses) | Sigma NS protein (S3-segment, region used for phylogenetic analyses) | Major outer capsid protein (S4-segment, region used for phylogenetic analyses) | |
Miyazaki-Bali/2007 | AB521793 (550–1545) | AB521794* (1–1241) | AB521795 (4–1107) | AB521796* (9–1094) |
Mammalian 1 strain Lang | L19774 (19–1275) | M13139 (33–1104) | ||
Mammalian 2 strain D5/Jones | M10261 (14–1213) | L19775 (19–1275) | X60066 (33–1104) | |
Mammalian 3 strain Dearing | HM159619 (13–1380) | L19776 (19–1275) | HM159621 (28–1128) | K02739 (33–1112) |
Mammalian 4 strain Ndelle | AF368035 (71–1387) | AF368036 (19–1275) | AF368037 (33–1104) | |
Avian strain 176 | AF218358 (630–1610) | AF059716 (16–1266) | AF059724 (24–1127) | af059720 (31–1134) |
Avian strain 138 | AF218359 (630–1610) | AF059717 (16–1266) | AF059725 (24–1127) | AF059721 (31–1134) |
Muscovy duck strain 89026 | AJ310525 (1–810) | AJ278102 (16–1266) | AJ133122 (24–1127) | AJ006476 (31–1134) |
HK23629/07 | EU165526 (529–1501) | EU170365 (1–1178) | EU170366 (1–1046) | EU170367 (9–1078) |
HK46886/09 | JF803294 (529–1501) | JF803296 (1–1178) | JF803298 (1–1046) | JF803300 (9–1078) |
HK50842/10 | JF803295 (529–1501) | JF803297 (1–1178) | JF803299 (1–1046) | JF803301 (9–1078) |
Kampar | EU448334 (527–1567) | EU448335 (16–1266) | EU448336 (29–1132) | EU44833 (30–1115) |
Melaka | EF026043 (584–1570) | EF026044 (16–1266) | EF026045 (29–1132) | EF026046 (30–1115) |
Nelson Bay | AF218360 (611–1582) | AF059718 (16–1266) | AF059726 (29–1132) | AF059722 (31–1116) |
Pulau | AY357730 (582–1565) | AY357731 (16–1266) | AY357732 (29–1132) | AY357733 (31–1116) |
Sikamat/MYS/2010 | JF811580 (570–1568) | JF811581 (16–1266) | JF811582 (29–1132) | JF811583 (30–1115) |
Xi river | GU188274 (611–1582) | GU188275 (29–1132) | ||
Baboon | AF059719 (17–1258) | AF059727 (23–1084) | AF059723 (31–1221) | |
Reptilian | AY238886 (32–1195) |
*: When deposited, the virus was named “Miyazaki.” In the present study, it is named “Miyazaki-Bali/2007.”