Table 1. Average genome-wide and refined haplotype sequence read depth from exome capture.

		Locus3
Phenotype Group1	Genome-wide	BH1	HH2	HH3
L1D2	77.65	56.16	101.98	86.88
HH2	44.83	42.31	50.24	49.30
BH1	35.24	32.47	39.17	37.64
HH3	49.16	45.52	55.72	53.18

¹Each group contains only the individuals that are heterozygous for HH2, HH3, or BH1, except for

²L1 Dominette 01449.

³UMD3.1 genome coordinates defining the refined haplotype boundaries are presented in the RESULTS.