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. Author manuscript; available in PMC: 2015 Apr 1.
Published in final edited form as: Metabolism. 2013 Dec 4;63(4):461–468. doi: 10.1016/j.metabol.2013.11.018

Table 2.

Significant GWAS findings (p < 5e-8) for HbA1c in the LLFS with replication information from the ARIC and HABC.

SNP Chr Position Gene AL* LLFS
EAF*
Beta SE r2 P ARIC
AL*
EAF* Beta SE P HABC
AL*
EAF* Beta SE P
No BMI-adj.
rs730497 7 44223721 GCK A/G .17 .16 .03 .008 5.9e-8 A/G .18 .05 .01 3.1e-9 G/A .84 .01 .03 .81
rs2908282 7 44248828 YKT6 A/G .17 .16 .03 .008 8.4e-9 A/G .18 .05 .01 2.2e-9 G/A .84 .003 .03 .93
rs17476364 10 71094504 HK1 T/C .90 .27 .04 .011 1.8e-11 G/A .88 .07 .01 2.9e-13 T/C .90 −.01 .04 .73
BMI-Adj.
rs730497 7 44223721 GCK A/G .17 .16 .03 .007 4.6e-7 A/G .18 .05 .01 4.1e-9 G/A .84 .003 .03 .92
rs2908282 7 44248828 YKT6 A/G .17 .16 .03 .007 5.9e-7 A/G .18 .05 .01 2.9e-9 G/A .84 −.001 .03 .97
rs17476364 10 71094504 HK1 T/C .90 .28 .04 .012 2.7e-11 G/A .88 .07 .01 9.6e-14 T/C .90 −.01 .04 .78
rs72805692 10 71099109 HK1 A/G .89 .25 .04 .013 2.2e-11 G/A .88 .07 .01 9.6e-14 A/G .89 −.01 .04 .72
rs10159477 10 71099888 HK1 A/G .16 −.18 .03 .009 3.1e-8 G/A .88 .07 .01 9.6e-14 G/A .85 −.01 .03 .78
*

AL, effect allele / non-effect allele; EAF, effect allele frequency.

SNPs significant for HbA1c without BMI adjustment but non-significant for HbA1c with BMI adjustment.

Same SNP rs10159477 used as best proxy for rs17476364 and rs72805692 (r2 = 0.71) in the ARIC.