TABLE 2.

Quality control measures compared between genomic and WGA DNA sample inputs

Run Parameter	Genomic DNA (n = 6)	WGA DNA (n = 6)	P
Mean index reads (%) (±SD)	10.3 (±1.44)	5.84 (±1.50)	0.0004
Mean coverage (±SD)	399.4 (±78.2)	264.5 (±58.0)	0.008
Targets with mean coverage <30× (%)	1.0 (±0.09)	4.0 (±1.5)	0.005
Targets with min coverage <30× (%)	4.8 (±0.8)	9.9 (±2.7)	0.005
Targets with max coverage <30× (%)	0.6 (±0.1)	2.6 (±1.1)	0.007