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. 2014 Mar 26;9(3):e93156. doi: 10.1371/journal.pone.0093156

Table 1. Statistics on data collection, phasing, and refinements of CBA120 TSP1 structure.

Data Collection
Se-Met TSP1 Wild-type TSP1
Peakb Inflectionb High Remoteb Low Remotec
Wavelength (Å) 0.97945 0.97961 0.94945 1.03320 1.03320
Space Group P212121
Cell Dimension (Å) 123.23, 153.09, 171.44 123.61, 147.82, 170.63
aResolution (Å) 20–2.2 (2.26–2.2) 20–2.2 (2.26–2.2) 20–2.2 (2.26–2.2) 90–1.8 (1.85–1.8) 73.9–1.8 (1.85–1.8)
aCompleteness (%) 99.0 (96.3) 98.7 (95.1) 98.9 (95.7) 99.6 (99.1) 99.8(99.6)
No. of unique Reflections 316917 317685 317478 297461 298512
aRedundancy 3.4 (2.6) 3.4 (2.6) 3.4 (2.6) 6.5 (4.2) 6.7 (4.9)
a R merge 0.087 (0.363) 0.096 (0.448) 0.095 (0.413) 0.087 (0.500) 0.094 (0.510)
a I/σ(I) 10.3 (2.6) 9.4 (2.0) 9.6 (2.2) 13.3 (2.1) 11.9 (2.2)
MAD-Phasing
aResolution 20–2.3 (2.41–2.30)
No. of Se atoms (found/correct) 32/29
aInitial figure of merit (FOM) 0.46 (0.27)
aFOM after density modification 0.67 (0.32)
Refinement
Se-Met TSP1 Wild-type TSP1
aResolution (Å) 90–1.8 (1.82–1.8) 63.4–1.8 (1.85–1.8)
a R work 0.187 (0.369) 0.189 (0.375)
a R free 0.204 (0.384) 0.207 (0.398)
RMSD bond length (Å)/bond angle (°) 0.008/1.1 0.007/1.4
Ramachandran plot: Favored/Allowed/Disallowed (%) 86.6/13.2/0.2 87.0/12.9/0.1
No. of protein atoms 16865 16972
No. of Zn2+ ion 1 1
No. of water molecules 2361 2449
a

The values in parentheses are for the highest resolution shell.

R merge = Σhkl [(Σj|Ij−<I>|)/Σj|Ij|].

R work = Σhkl| |Fo|−|Fc| |/Σhkl|Fo|, where Fo and Fc are the observed and calculated structure factors, respectively.

R free is computed from 5% randomly selected reflections that were omitted from the refinement.

b

data processed with anomalous signal.

c

data processed without anomalous signal (for refinement only).