Table 3.
Calculated ligand – telomeric quadruplex DNA docking interaction energies (kcal mol-1).
G-Quadruplex Interaction Energy | |||
---|---|---|---|
Total Energy | van der Waals | Electrostatic | |
9a | - 1103.23 ± 13.61 | - 101.06 ± 3.21 | - 1002.17 ± 12.83 |
9b | - 1157.49 ± 7.33 | - 102.39 ± 3.02 | - 1055.07 ± 7.42 |
9c | - 1177.01 ± 16.24 | - 105.31 ± 3.79 | - 1071.66 ± 18.56 |
9d | - 1102.44 ± 10.98 | - 94.20 ± 5.04 | - 1008.24 ± 14.99 |
9e | -1188.99 ± 14.71 | - 96.98 ± 3.10 | - 1092.01 ± 12.96 |
9f | - 1171.68 ± 28.58 | - 103.69 ± 3.56 | - 1069.80 ± 27.58 |
9g | - 1140.28 ± 34.06 | - 89.54 ± 4.37 | - 1050.74 ± 31.76 |
9h | - 1132.65 ± 25.47 | - 102.92 ± 2.94 | - 1029.72 ± 25.30 |
9i | - 134.71 ± 5.52 | - 92.02 ± 2.39 | - 42.68 ± 6.48 |
15a | - 1174.23 ± 17.09 | - 100.89 ± 3.44 | - 1073.36 ± 16.11 |
15b | - 1182.22 ± 19.06 | - 102.35 ± 2.98 | - 1079.88 ± 20.41 |
15c | - 1167.67 ± 16.91 | - 103.31 ± 2.66 | - 1064.37 ± 16.35 |