Table 1. Protein and nucleotide sequence analysis of 17 xrp genes.
RS105 Xrp | Protein ID in BLS256 | Gene ID in BLS256 | Ser and Proa | Ser | Pro | Leub | Asp and Gluc | 3rd AA | 4th AA | PIP box-liked | −10 Box-like | |
position | 5′-3′ sequence | |||||||||||
Xrp1 | YP_005627937 | XOC_1601 | 8 | 6 | 2 | 8 | 0 | T | H | −96/−75 | TTCGC-N12-TTCGC | Ne |
Xrp2 | YP_005630809 | XOC_4584 | 6 | 4 | 2 | 2 | 0 | K | F | −106/−85 | TTCGT-N12-TTCGT | N |
Xrp3 | YP_005630213 | XOC_3956 | 10 | 6 | 4 | 3 | 1 | T | R | N | N | |
Xrp4 | YP_005630212 | XOC_3955 | 8 | 6 | 2 | 7 | 2 | R | H | N | N | |
Xrp5 | YP_005627898 | XOC_1550 | 8 | 7 | 1 | 7 | 2 | G | E | N | N | |
Xrp6 | YP_005629702 | XOC_3440 | 6 | 5 | 1 | 4 | 1 | V | E | N | N | |
Xrp7 | YP_005630808 | XOC_4583 | 9 | 2 | 7 | 6 | 1 | S | L | N | N | |
Xrp8 | YP_005628761 | XOC_2462 | 9 | 6 | 3 | 6 | 1 | G | L | −81/−56 | TTCGA-N16-TTCGA | N |
Xrp9 | YP_005628272 | XOC_1951 | 11 | 3 | 8 | 8 | 0 | L | R | −114/−69 | TTCGT-N6-TTCGA-N25-TTCGC | -N33-TATGAT |
Xrp10 | YP_005626937 | XOC_0560 | 6 | 2 | 4 | 1 | 0 | V | P | N | N | |
Xrp11 | YP_005629396 | XOC_3130 | 8 | 8 | 0 | 4 | 1 | I | Q | N | N | |
Xrp12 | YP_005630266 | XOC_4010 | 5 | 2 | 3 | 8 | 1 | A | L | N | N | |
Xrp13 | YP_005627233 | XOC_0860 | 5 | 1 | 4 | 5 | 1 | L | A | −240/−211 | TTCGC-N20-TTCGG | N |
Xrp14 | YP_005626509 | XOC_0084 | 10 | 3 | 7 | 4 | 2 | D | D | −61/−26 | TTCGC-N25-TTCGC | N |
Xrp15 | YP_005629104 | XOC_2829 | 2 | 1 | 1 | 5 | 1 | I | E | −121/−90 | TTCGA-N21-TTCGC | N |
Xrp16 | YP_005629103 | XOC_2828 | 5 | 3 | 2 | 5 | 0 | A | P | −362/−331 | TTCGA-N22-TTCGG | N |
Xrp17 | hrpFB | 2 | 2 | 0 | 6 | 1 | Y | F | N | N |
Number of Ser and Pro residues in the N-terminal 50 amino acids.
Number of Leu residues in the N-terminal 50 amino acids.
Number of Asp and Glu residues in the N-terminal 12 amino acids.
Includes an imperfect PIP-box like sequence (TTCGB-Nx-TTCGB,B,A/T/C/G) in the respective promoter.
No corresponding characteristics.