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. Author manuscript; available in PMC: 2014 Mar 31.

Published in final edited form as: Mol Psychiatry. 2008 Dec 9;14(3):252–260. doi: 10.1038/mp.2008.133

Table 1. Comparison of SNPs by genic location in schizophrenia (SZ) and bipolar (BD) datasets.

SZ
	Number of SNPs in genes				Number of SNPs outside genes
α	Observed	Permuted		p	Observed	Permuted		p
α	Observed	mean	SD	p	Observed	mean	SD	p
0.05	7480	7243.4	180.8	0.098	11534	11594.0	244.4	0.604
0.01	1688	1447.7	75.5	<0.001	2381	2313.9	101.5	0.256
0.001	222	147.5	22.9	0.002	266	234.7	29.2	0.143

BD
	Number of SNPs in genes				Number of SNPs outside genes
α	Observed	Permuted		p	Observed	Permuted		p
α	Observed	mean	SD	p	Observed	mean	SD	p
0.05	7647	7261.18	190.73	0.19	11863	11602.26	246.86	0.135
0.01	1722	1451.03	78.47	<0.001	2354	2314.51	104.39	0.352
0.001	188	144.01	22.94	0.055	227	231.60	29.19	0.548