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Number of validated true/false sSNVs detected using the five tools in a melanoma sample
| Tool |
All sSNVs |
High confidence sSNVs |
||
|---|---|---|---|---|
| # TP | # FP | # TP | # FP | |
| JointSNVMix |
119 |
2 |
108 |
0 |
| MuTect |
119 |
9 |
115 |
0 |
| SomaticSniper |
116 |
4 |
104 |
0 |
| Strelka |
117 |
0 |
113 |
0 |
| Varscan 2 | 119 | 6 | 118 | 2 |
FP: false-positive sSNVs; TP: true-positive sSNVs.
