Table 1.
Structural Statistics for the Solution Structure of BaSrtCΔ55a
| 〈SA〉 | |||
|---|---|---|---|
| rmsd from NOE restraints (Å)b | |||
| all (2330) | 0.029 ± 0.001 | 0.046 | |
| sequential (|i − j| = 1) (617) | 0.032 ± 0.001 | 0.058 | |
| medium-range (|i − j| ≤ 4) (292) | 0.039 ± 0.002 | 0.054 | |
| long-range (|i − j| ≥ 5) (977) | 0.027 ± 0.001 | 0.040 | |
| intraresidue (444) | 0.021 ± 0.001 | 0.034 | |
| rmsd from dihedral angles restraints (deg)c (196) deviation from idealized covalent geometry |
0.182 ± 0.087 | 0.095 | |
| bonds (Å) | 0.007 ± 0.003 | 0.004 | |
| angles (deg) | 0.414 ± 0.172 | 0.523 | |
| impropers (deg) | 0.191 ± 0.081 | 0.493 | |
| PROCHECK results (%)d | |||
| most favorable region | 85.6 ± 2.6 | 89.0 | |
| additionally allowed region | 14.4 ± 2.6 | 11.0 | |
| generously allowed region | 0.0 ± 0.0 | 0.0 | |
| disallowed region | 0.0 ± 0.0 | 0.0 | |
| coordinate precision (Å)e,f | |||
| protein backbone | 0.42 ± 0.07 | ||
| protein heavy atoms | 0.82 ± 0.05 |
The notation of the NMR structures is as follows. 〈SA〉 represents the final 20 simulated annealing structures. represents the average energy-minimized structure. The number of terms for each restraint is given in parentheses.
None of the structures exhibited distance violations of >0.5 Å or dihedral angle violations of >5°.
The experimental dihedral angle restraints were as follows: 95 ϕ, 94 ψ, and 39 χ1 angular restraints.
Determined using PROCHECK.62
The coordinate precision is defined as the average atomic rmsd of the 20 individual SA structures and their mean coordinates. These values are for residues 63−85, 94−113, 124−172, and 182−198 of BaSrtCΔ55. Backbone atoms are N, Cα, and C′. Assignments were made for residues 58−89, 93−115, 122−183, and 184−198 of BaSrtCΔ55.
Structure calculations also included 58 hydrogen bonds. These bonds were included in xplor structure calculations as HBDB terms as described in ref 32.