Table 9. Summary statistics for the conservation analysis obtained from the PhastCons dataset of UCSC Genome Browser (http://genome.ucsc.edu/) for the 9 novel IR hub miRs (which are not previously linked with PD) [32].
miR name | Position (obtained from miRBase) [35] | PhastCons Score | ||
Smallest | Biggest | Average | ||
hsa-miR-200c | chr12: 7072862–7072929 | 562 | 562 | 562 |
hsa-miR-200b | chr1: 1102484–1102578 | 314 | 566 | 440 |
hsa-miR-200a | chr1: 1103243–1103332 | 509 | 510 | 510 |
hsa-miR-17 | chr13: 92002859–92002942 | 659 | 659 | 659 |
hsa-miR-19a | chr13: 92003145–92003226 | 720 | 720 | 720 |
hsa-miR-20a | chr13: 92003319–92003389 | 750 | 750 | 750 |
hsa-miR-18a | chr13: 92003005–92003075 | 720 | 720 | 720 |
hsa-miR-141 | chr12: 7073260–7073354 | 558 | 558 | 558 |
hsa-miR-92a * | chr13: 92003568–92003645 | 750 | 750 | 750 |
* hsa-miR -92a appeared as a common hub in both regulatory and co-expression network.