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. 2014 Mar 26;8:25. doi: 10.3389/fninf.2014.00025

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Copyright © 2014 Bartsch, Thompson, Jernigan and Dale.

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

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Screen capture of the SNP browser application used to explore and extract genetic information available for the PING study. A search mask is used to specify a gene (SSH, sonic hedgehog). Utilizing a database with 80,000 entries, the SNP browser obtains the available chromosome number (7) and the basepair location (155,592,735–155,601,766) for this gene. The table is filled with SNP entries that fall in the range of the basepair location. In this example, three SNP entries are available. The user has selected SNP number 2 indicated by the dark blue checkbox and the corresponding SNP name has been copied to the list of SNP names for download. Selecting the download option would provide the user with a spreadsheet of the alleles for this SNP for all PING subjects.