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. 2014 Apr 18;46(4):e91. doi: 10.1038/emm.2014.6

Table 1. A list of primers and reaction conditions for RT-PCR analysis.

Gene (symbol) Sequence (5′→3′) Tm (°C) Species Product size (bp)
IL-1β
  F—TGAAGCAGCTATGGCAACTG 55 Rat 199
  R—TGCCTTCCTGAAGCTCTTGT      
         
TNFα
  F—TGCCTCAGCCTCTTCTCATT 55.4 Rat 367
  R—TGTGGGTGAGGAGCACATAG      
         
NOS2
  F—CACCTTGGAGTTCACCCAGT 60 Rat 170
  R—ACCACTCGTACTTGGGATGC      
         
ICAM-1
  F—CAGGGTGCTTTCCTCAAAAG 55 Rat 249
  R—GGGCATGAGACTCCATTGTT      
         
MMP-9
  F—GTCTTCCCCTTCGTCTTCCT 55 Rat 249
  R—AGGGGAGTCCTCGTGGTAGT      
         
ITGa5
  F—AGGTGACGGGACTCAACAAC 60 Rat 151
  R—GGGCATTTCAGGACTTGTGT      
         
SCIN
  F—ACCAGAGACGAGCTGACGAT 60 Rat 101
  R—GGCTCTTTGCCTTGAGACAC      
         
Rac1
  F—TTTGAAAATGTCCGTGCAAA 60 Rat 306
  R—CAGCAGGCATTTTCTCTTCC      
         
scin
  F—ACCAGAGACGAGCTGACGAT 60 Rat 101
  R—GGCTCTTTGCCTTGAGACAC      
         
β-Actin
  F—TGTTGGCATAGAGGTCTTTACGG 60 Rat 278
  R—TGAGAGGGAAATCGTGCGTG      
         
GAPDH
  F—ACCACAGTCCATGCCATCAC 60 Rat 452
  R—TCCACCACCCTGTTGCTGTA      
         
IL-1 β
  F—CCGATGGGTTGTACCTTGTC 60 Mouse 284
  R—CGGACTCCGCAAAGTCTAAG      
         
TNFα
  F—GACCTTCCAGGATGAGGACA 60 Mouse 283
  R—AGGCCACAGGTATTTTGTCG      
         
β-actin
  F—TGTTACCAACTGGGACGACA 60 Mouse 391
  R—TCTCAGCTGTGGTGGTGAAG      

Abbreviations: IL, interleukin; RT-PCR, Reverse transcription polymerase chain reaction; TNF, tumor necrosis factor.