Table 2.
Summary of RNA quality control analysis. RNA concentrations, RNA integrity number (RIN), rRNA ratios, positive PCR control (PPC), and reverse transcription control (RTC) used during qRT-PCR of transporter gene expression analysis for mRNA isolated from hypoxic and normoxic rat choroid-retina (CR).
Sample Name | RNA concentrations (ng/μl) | RIN number | rRNA Ratio (28s/18s) | Positive PCR Control (Ct PPC) | ΔCt (Avg Ct RTC - Avg Ct PPC) |
---|---|---|---|---|---|
Hypoxic-CR1 | 603 | 9.0 | 1.6 | 18.1 ± 0.17 | 3.58 |
Hypoxic-CR2 | 898 | 8.9 | 1.6 | 20.6 ± 0.12 | 3.87 |
Hypoxic-CR3 | 820 | 8.6 | 1.8 | 19.0 ± 0.29 | 4.65 |
Normoxic-CR1 | 637 | 9.0 | 1.7 | 20.1 ± 0.21 | 3.86 |
Normoxic-CR2 | 523 | 9.1 | 1.7 | 19.1 ± 0.23 | 3.82 |
Normoxic-CR3 | 565 | 9.3 | 1.7 | 18.1 ± 0.19 | 4.10 |