Table 1. Distribution of sequence reads to different viral types/species in 12 NPA pools from Chile.
Virus | NPA pool no. and no. of reads | Total reads | |||||||||||
1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | ||
1 246 305 | 1 381 713 | 1 561 246 | 1 775 509 | 1 136 293 | 1 383 673 | 1 327 383 | 1 139 854 | 664 165 | 621 987 | 1 033 709 | 1 462 032 | ||
Anelloviruses | 247 | 1115 | 605 | 43 | 81 | 907 | 950 | 575 | 58 | 123 | 645 | 5347 | |
Enterovirus C | 1759 | 772 | 2531 | ||||||||||
Beta coronavirus | 1198 | 1198 | |||||||||||
Bocavirus 1 | 326 | 12 | 116 | 454 | |||||||||
Respiratory syncytial virus | 10 | 13 | 13 | 119 | 4 | 159 | |||||||
Human adenovirus 3 | 93 | 93 | |||||||||||
Enterovirus B | 85 | 85 | |||||||||||
Human rhinovirus A | 5 | 10 | 11 | 11 | 37 | ||||||||
Human rhinovirus C | 8 | 2 | 2 | 12 | |||||||||
Human parainfluenza 3 | 2 | 8 | 10 | ||||||||||
Adeno-associated virus | 10 | 10 | |||||||||||
Human metapneumovirus | 6 | 2 | 8 | ||||||||||
Human rhinovirus B | 4 | 4 | |||||||||||
Human parechovirus | 2 | 2 | 4 | ||||||||||
Cyclovirus | 1 | 1 |