Table 1.
dbSNp ID | Alleles a | MAF b | Odds ratio | Confidence interval | F_Ac c | F_U d | Chi-sq e | P -value f | Alpha g |
---|---|---|---|---|---|---|---|---|---|
rs6716901 |
G/A |
0.13 |
1.70 |
0.98 to 3.02 |
0.18 |
0.11 |
6.87 |
0.008 |
0.016 |
rs2056202 |
C/T |
0.13 |
0.76 |
0.39 to 1.46 |
0.10 |
0.13 |
1.29 |
0.26 |
0.016 |
rs3765166 | G/A | 0.23 | 1.31 | 0.81 to 2.07 | 0.27 | 0.22 | 2.51 | 0.11 | 0.016 |
Significant P-values are written in italics. MAF, minor allele frequency.
acommon allele is listed first.
bcalculated by Plink v1.07 in analysed sample.
cthe frequency of the minor allele in cases.
dthe frequency of the minor allele in controls.
ethe chi-squared statistic for this test (1 df).
fcomputed on the basis of likelihood ratio test.
gdetermined after evaluating the number of completely independent SNPs using SNPSpD.