Table 2. Comparison between miRNAs profile of pool plants and individual cultivar libraries.+ = the miRNA profile is the same; - contrasting miRNA profile.
miRNA | Sequence | Comparison 1a | Comparison 2b |
miR1439 I | ATTTGGAACGGAGGGAGTACT | + | + |
miR156 I | GACAGAAGAGAGTGAGCACA | + | + |
miR156 II | TGACAGAAGAGAGCGAGCAC | + | − |
miR156 VI | TTGACAGAAGAGAGCGAGCAC | − | + |
miR159 II | GGATTGAAGGGAGCTCTG | − | + |
miR159 III | GTTGGATTGAAGGGAGCTCTG | + | − |
miR159 V | TCTTTGGATTGAAGGGAGCTCTG | − | + |
miR159 VII | TGGATTGAAGGGAGCTCTG | + | + |
miR159 X | TTGGATTGAAGGGAGCTCTG | + | + |
miR159 XI | TTGGATTGAAGGGAGCTCTGC | + | + |
miR159 XIII | TTTGGATTGAAGGGAGCT | + | − |
miR159 XVI | TTTGGATTGAAGGGAGCTCTG | + | + |
miR159 XVII | TTTGGATTGAAGGGAGCTCTGC | + | − |
miR162* I | GGGCGCAGTGGTTTATCGATC | − | + |
miR164 I | TGGAGAAGCAGGGCACGTGCA | + | + |
miR164 II | TGGAGAAGCAGGGCACGTGCT | − | + |
miR166 I | TCTCGGACCAGGCTTCATTCC | − | + |
miR166 II | TTCGGACCAGGCTTCATTCCC | + | + |
miR166* I | AATGTTGTCTGGCTCGAGGTG | + | − |
miR166* III | GAATGATGTCCGGTCCGAAGA | + | + |
miR166* IV | GGAATGTTGTCTGGCTCGGGGG | + | + |
miR167 III | TGAAGCTGCCAGCATGATCTA | + | + |
miR167 IV | TGAAGCTGCCAGCATGATCTG | + | + |
miR167 V | TGAAGCTGCCAGCATGATCTGA | + | − |
miR167 VII | TGAAGCTGCCAGCATGATCTGG | − | + c |
miR168 I | CCCGCCTTGCACCAAGTGAAT | − | + |
miR168 II | TCGCTTGGTGCAGATCGGGAC | + | + |
miR169 III | CAGCCAAGGATGACTTGCCGG | − | + |
miR172 I | AGAATCTTGATGATGCTGCAT | + | − |
miR1878 I | ATTTGTAGTGTTCAGATTGAGTTT | + | − |
miR390 I | AAGCTCAGGAGGGATAGCGCC | + | + |
miR390 II | AGCTCAGGAGGGATAGCGCC | − | + |
miR395 III | TGAAGTGTTTGGGGGAACTC | + | + |
miR396 II | TCCACAGGCTTTCTTGAACTG | + | + |
miR397 II | TTGAGTGCAGCGTTGATGAGC | − | + c |
miR398 II | TGTGTTCTCAGGTCGCCCCCG | + | + |
miR444 II | TGCAGTTGTTGCCTCAAGCTT | + | − |
miR528 I | TGGAAGGGGCATGCAGAGGAG | + | − |
miR529 I | AGAAGAGAGAGAGTACAGCCT | − | + |
Comparison 1: influence of genetic variation on miRNA response to water depletion (T24h/S24h vs. CTC6/SP903414).
Comparison 2: influence of water depletion treatment in miRNA response on each genotype (CTC6/T0h vs. T24h/T0h) and (SP903414/S0h vs. S24h/S0h).
occur only in sensitive cultivars.