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. 2014 Mar 19;45(1):33. doi: 10.1186/1297-9716-45-33

Table 1.

Amino-acid composition of the four tested WNV strains

Viral protein Amino-acid position Consensus NY99 Spain/2007 Italy/2009 Italy/2008
C
 34
 M
 -
 V
 -
 -
E
 51
 A
 -
 T
 -
 -
88
 P
 -
 S
 -
 -
126
 T
 I
 -
 -
 -
159
 I
 V
 -
 -
 -
NS1
 35
 Y
 -
 H
 -
 -
70
 S
 A
 -
 -
 -
208
 D
 -
 H
 -
 -
284
 T
 -
 -
 M
 -
289
 E
 -
 G
 -
 -
NS2A
 85
 I
 -
 -
 V
 V
105
 I
 -
 -
 -
 T
NS2B
 103
 A
 V
 -
 -
 -
NS3
 249
 P
 -
 -
 T
 -
356
 I
 T
 -
 -
 -
NS4A
 85
 I
 A
 V
 -
 -
100
 P
 -
 -
 S
 S
NS4B
 115
 A
 -
 T
 -
 -
249
 D
 E
 -
 -
 -
NS5 53
 H
 -
 -
 -
 Y
258
 V
 -
 -
 A
 A
422
 R
 -
 -
 K
 K
426
 E
 -
 A
 -
 -
436 M - I - -

The amino-acid sequence of the four WNV strains is compared with the WNV consensus sequence. From the left, the first and second columns display viral protein and amino-acid position, respectively, followed by the column displaying the consensus sequence and those corresponding to each WNV strain. The amino-acid residue occupying each position is indicated with the single letter amino-acid code.