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. 2014 Apr 3;9(4):e93631. doi: 10.1371/journal.pone.0093631

Table 2. qPCR primer information and predicted product size.

Target bacterial group Primers DNA Sequence (5′- 3′) Predicted PCR productsize (bp) Annealingtemp (°C) Reference
Atopobium cluster Atopo-F GGGTTGAGAGACCGACC 190 55 [38]
Atopo-R CGGRGCTTCTTCTGCAGG
Bacteroides fragilis group Bfra-F ATAGCCTTTCGAAAGRAAGAT 495 50 [39]
Bfra-R CCAGTATCAACTGCAATTTTA
Bifidobacterium genus Bifid-F CTCCTGGAAACGGGTGG 550 55 [39]
Bifid-R GGTGTTCTTCCCGATATCTACA
Clostridium coccoides group Ccoc-F AAATGACGGTACCTGACTAA 440 50 [39]
Ccoc-R CTTTGAGTTTCATTCTTGCGAA
Clostridium leptum group sg-Clept-F GCACAAGCAGTGGAGT 239 55 [38]
sg-Clept-R3 CTTCCTCCGTTTTGTCAA
Clostridium perfringens group ClPER-F AGATGGCATCATCATTCAAC 170 60 [40]
ClPER-R GCAAGGGATGTCAAGTGT
Desulfovibrio genus Dsv-F CCGTAGATATCTGGAGGAACATCAG 135 63 [41]
Dsv-R ACATCTAGCATCCATCGTTTACAGC
Enterobacteriaceae family Enter-F TGCCGTAACTTCGGGAGAAGGCA 428 60 [42]
Enter-R TCAAGGACCAGTGTTCAGTGTC
Lactobacillus genus Lac-F AGCAGTAGGGAATCTTCCA 341 58 [43]
Lac-R CACCGCTACACATGGAG
Prevotella genus g-Prevo-F CACRGTAAACGATGGATGCC 528 55 [38]
g-Prevo-R GGTCGGGTTGCAGACC
All bacteria Uni331F TCCTACGGGAGGCAGCAGT 466 58 [44]
Uni797R GGACTACCAGGGTATCTATCCTGTT