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. 2014 Mar 7;15(3):4158–4188. doi: 10.3390/ijms15034158

Table 4.

Modulation of gut microbiota in humans.

Reference Intervention/modulation Metabolic disorder Study design Effects on gut microbiota and metabolic derangements including other alterations
Andreasen et al. and Asemi et al. [47,48] Probiotic (L. acidophilus and B. animalis) Insulin resistance; Diabetes mellitus Randomized, double-blind, controlled studies.
45 males with type 2 diabetes, impaired or normal glucose tolerance treated with/without L. acidophilus for 4 weeks and controlled clinical trial; 70 pregnant women given a probiotic yoghurt containing L. acidophilus and B. animalis (200 g/day) for 9 weeks
L. acidophilus
↑ Insulin sensitivity in probiotic group
↓ insulin resistance
Ejtahed et al. [49,50] Probiotic (L. acidophilus and B. lactis) Diabetes mellitus Randomized, double-blind, controlled trials.
60–64 patients with type 2 diabetes mellitus consumed probiotic/non-prebiotic yogurt containing L. acidophilus and B. lactis (300 g/day) for 6 weeks
Gut microbiota: Uncharacterized
↓ Blood glucose and HbA1c
↓ TC and LDL-C in probiotic group
↓ Atherogenic indices (TC:HDL-C ratio and LDL-C:HDL-C ratio)
↑ Erythrocyte TAS, SOD and GPx activities
↓ Serum MDA
Kadooka et al. and Jung et al. [52,53] Probiotic (L. gasseri) Overweight and Obesity Randomized, multicenter, double-blind, placebo-controlled trial.
57 or 87 obese subjects received fermented milk containing L. gasseri or without (200 g/day) for 12 weeks
↓ Body weight
↓ BMI
↓ Abdominal visceral, subcutaneous and total fat areas in prebiotic group
↓ Waist and hip circumferences
↓ Waist-to-hip ratio
Asemi et al. [51] Probiotic and prebiotic.
Probiotic (L. acidophilus, L. casei, L. rhamnosus, L. bulgaricus, B. breve, B. longum, S. thermophilus)
Prebiotic (fructo-oligosaccharide)
Diabetes mellitus Randomized, double-blind, placebo-controlled clinical trial.
54 diabetic patients ingested a multispecies probiotic/non-prebiotic supplement (consisting of L. acidophilus, L. casei, L. rhamnosus, L. bulgaricus, B. breve, B. longum, S. thermophilus and fructo-oligosaccharide) for 8 weeks
Gut microbiota: Uncharacterized
↓ Blood glucose increments
↓ Insulin resistance
↓ Serum hs-CRP
↑ Plasma GSH levels
Cani et al. and Parnell and Reimer [70,71] Prebiotic (oligofructose or a mixture of glucosyl- (fructosyl)n-fructose and (fructosyl)mfructose extracted from chicory roots) Healthy, overweight and obesity Randomized, double-blind, parallel, placebo-controlled trial 10 healthy adults given 16 g of prebiotics/day ↑ Marker of gut microbiota fermentation (breath-hydrogen excretion)
↓ Body weight
↓ Caloric intake
↓ Plasma glucose and postprandial glucose responses
↓ Insulin levels
↑ Levels of GLP-1 and peptide YY
↓ Ghrelin levels
Sasaki et al. [72] Prebiotic (transglucosidase) Healthy and Diabetes mellitus Randomized, double-blind, parallel, placebo-controlled study.
60 diabetic patients received 300 or 900 mg/day of transglucosidase for 12 weeks.
↑ Bacteroidetes-to-Firmicutes ratio
↓ Body weight
↓ Blood glucose
Jernberg et al. and O’Sullivan et al. [90,91] Antibiotics (Clindamycin) Healthy adults 42 elderly subjects were treated with one antibiotic within 1 month ↓ Bacteroides
↓ Bifidobacterium spp. Metabolic derangements: Unevaluated
Zhang et al. And Kong et al. [25,92] Gastric bypass Obesity Comparison of the structures of microbes in individuals with normal weight, morbid obesity and post-gastric-bypass surgery ↓ Firmicutes
↑ Proteobacteria
↑ Alterations of WAT genes
↑ Associations between gut microbiota composition and WAT gene expression Metabolic derangements: Unevaluated
Kashyap et al. [9395] Bariatric surgery Obesity and Diabetes mellitus Randomized, prospective, controlled and nonrandomized, controlled observational trials
Type 2 diabetic subjects with moderate obesity received bariatric surgery
Changes of gut microbial composition 3 months before and after RYGB in morbidly obese patients with type 2 diabetes mellitus
↑ Proteobacteria
↓ Firmicutes and Bacteroidetes
↑ Weight loss
↓ Blood glucose
↓ HbA1c
↑ Pancreatic β-cell function
↑ Insulin sensitivity
↓ Adiposity
↑ GLP-1 and peptide YY levels
↓ Ghrelin levels
Duncan et al. [96,97] Weight loss/Caloric restriction Obesity Obese and non-obese individuals under conditions of weight maintenance, and undergoing weight loss on reduced carbohydrate diets for 4 weeks ↓ Total fecal SCFAs
↓ Abundance of butyrate-producing bacteria such as Firmicutes, Bifidobacteria, Eubacterium rectale and Roseburia spp.
Metabolic derangements: Unevaluated
Kim et al. [98] Weight loss/Caloric restriction/Vegetarian diet Obesity and Diabetes mellitus Obese individuals with type 2 diabetes and/or hypertension assigned to a vegetarian diet for 1 month ↓ Firmicutes-to-Bacteroidetes ratio
↓ Body weight
↓ Fasting and postprandial glucose
↓ HbA1c
↓ TC, LDL-C and TG
Santacruz et al. and Nadal et al. [99,100] Weight loss, caloric restriction or increased physical activity Obesity Longitudinal intervention study Overweight and obese individuals placed on a calorie-restricted diet and increased physical activity program for 10 weeks ↑ Weight loss
↓ BMI and BMI z-score
↑ Total bacteria, Bacteroides-Prevotella group and Lactobacillus group counts
↓ Clostridium coccoides group, Bifidobacterium longum, and Bifidobacterium adolescentis counts
Reduced body weight and BMI z-score correlated with reduction of certain gut microbes

HbA1c, glycated hemoglobin; LDL-C, low-density lipoprotein cholesterol; HDL-C, high-density lipoprotein cholesterol; TG, triglycerides; TC, total cholesterol; SOD, superoxide dismutase; GPx, glutathione peroxidase; MDA, malondialdehyde; TAS, total antioxidant status; GSH, glutathione; BMI, body mass index; hsCRP, high-sensitivity C-reactive protein; SCFAs, short chain fatty acids; WAT, white adipose tissue; ↑ = Increase/enhance; ↓ = Reduce/suppress.