Table 1. Primers used in this study.
Detection for antibiotic resistance genes | 16S rRNA gene sequencing | ||
Primers | Sequence(5′-3′) | Primers | Sequence(5′-3′) |
CTX-M-F | CGTTGTAAAACGACGGCCAGTGAA | 5F | TTGGAGAGTTTGATCCTGGCTC |
TGTGCAGYACCAGTAARGTKATGGC | 341F | CTACGGGAGGCAGCAGTGGG | |
CTX-M-R | TGGGTRAARTARGTSACCAGAAYCAGCGG | 810R | GCGTGGACTTCCAGGGTATCT |
IMP-F | GGAATAGAGTGGCTTAAYTCTC | 1194R | ACGTCATCCCCACCTTCCTC |
IMP-R | GGTTTAAYAAAACAACCACC | 1485R | TACGGTTACCTTGTTACGAC |
KPC-F | CGTCTAGTTCTGCTGTCTTG | ||
KPC-R | CTTGTCATCCTTGTTAGGCG | ||
NDM-F | GGTTTGGCGATCTGGTTTTC | ||
NDM-R | CGGAATGGCTCATCACGATC | ||
OXA-23like-F | GATCGGATTGGAGAACCAGA | ||
OXA-23like-R | ATTTCTGACCGCATTTCCAT | ||
OXA-24/40like-F | GGTTAGTTGGCCCCCTTAAA | ||
OXA-24/40like-R | AGTTGAGCGAAAAGGGGATT | ||
OXA48-F | GCGTGGTTAAGGATGAACAC | ||
OXA48-R | CATCAAGTTCAACCCAACCG | ||
OXA-58like-F | CCCCTCTGCGCTCTACATAC | ||
OXA-58like-R | AAGTATTGGGGCTTGTGCTG | ||
VIM-F | GATGGTGTTTGGTCGCATA | ||
VIM-R | CGAATGCGCAGCACCAG |