Table 2.

Map-based cloning of genes using mutants or QTL as a tool involved in rice high yield in recent years

Trait	QTL or mutant	QTL/gene	RAP-DB	Encoded product	Reference
Plant architecture	mutant	HTD2	Os03g0203200	Putative esterase	Liu et al. (2009)
	mutant	OsCD1	Os12g0555600	Cellulose synthase	Luan et al. (2011)
	mutant	OsGA2ox6	Os04g0522500	Gibberellin 2-oxidase	Huang et al. (2010)
	QTL	IPA1/WFP	Os08g0509600	Squamosa promoter binding protein-like 14	Jiao et al. (2010)
	QTL	OsPH1	Os01g0881500	Chitin-inducible gibberellin-responsive protein	Kovi et al. (2011)
	mutant	LAZY1	Os11g0490600	Expressed protein	Li et al. (2007)
	mutant	PROG1	Os07g0153600	Cys2-His2 zinc finger protein	Jin et al. (2008)
	mutant	DLT	Os06g0127800	GRAS family protein (involved in brassinosteroid)	Tong et al. (2012)
Panicle characters	mutant	EUI1	Os05g0482400	Cytochrome P450 monooxygenase	Zhang et al. (2008)
	mutant	sui1	Os01g0118300	Phosphatidyl serine synthase	Zhu et al. (2011)
	mutant	SP1	Os11g0235200	Peptide transporter	Li et al. (2009b)
	mutant	LAX2	Os04g0396500	Nuclear protein with a plant-specific conserved domain	Hiroaki et al. (2011)
	QTL	Ghd7	Os07g0261200	CCT -domain protein	Xue et al. (2008)
	mutant	DEP2/SRS1	Os07g0616000	Novel plant-specific protein	Li et al. (2010a)
	mutant	LAZY1	Os11g0490600	Specific herb protein	Chen et al. (2012)
	mutant	EG1	Os01g0900400	Lipase	Li et al. (2009a)
	QTL	DTH8/Ghd8	Os08g0174500	OsHAP3 subunit of a CCAAT-box-binding protein	Wei et al. (2010)
	QTL	DEP1/qPE9-1	Os09g0441900	PEBP-like domain protein	Huang et al. (2009)
	mutant	DEP3	Os06g0677000	Patatin-like phospholipase A2 protein	Qiao et al. (2011)
	mutant	OsPIN2	Os06g0660200	Auxin efflux transporter	Chen et al. (2012)
Grain	QTL	GS3	Os03g0407400	Transmembrane protein	Yang et al. (2010)
	QTL	Gn1a	Os01g0197700	Cytokinin oxidase/dehydrogenase	Li et al. (2013)
	QTL	GS5	Os05g0158500	Serine carboxypeptidase	Li et al. (2011b)
	QTL	GW2	Os02g0244100	RING-type E3 ubiquitin ligase	Song et al. (2007)
	QTL	GW5	Os05g0187500	Novel nuclear protein	Weng et al. (2008)
	QTL	GW8	Os08g0531600	Squamosa promoter binding protein-like 16	Wang et al. (2012b)
Tiller	mutant	MOC1	Os06g0610350	GRAS family nuclear protein	Li et al. (2003)
	QTL	TAC1	Os09g0529300	Unknown	Jiang et al. (2012)
Heading and grain weight	mutant	HGW	Os06g0160400	Ubiquitin-associated domain protein	Li et al. (2012b)
Grain filling	QTL	GIF1	Os04g0413500	Cell wall invertase	Wang et al. (2010a)
Shattering	QTL	SHA1	Os04g0670900	Plant-specific transcription factor	Lin et al. (2007)