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. 2014 Apr 7;9(4):e93961. doi: 10.1371/journal.pone.0093961

Table 1. Characteristics of the studies included in the meta-analysis.

Study Year Ethnicity Diagnostic criteria Study design No. of cases No. of controls MAF in cases/controls Genotyping method P HWE
Sakura [15] 1996 Caucasian T2D patients Population based-study 133 82 0.30/0.30 PCR-SSCP 0.05
Inoue [16] 1997 Caucasian T2D patients Population based-study 291 164 0.34/0.34 PCR-RFLP >0.05
Hani [17] 1998 Caucasian T2D patients Population based-study 191 114 0.49/0.37 PCR-SSCP 0.95
Altshuler [18] 2000 Caucasian T2D per WHO criteria Family based-study 333 trios / / SBE-FRET, SBE-FP /
Yamada [19] 2001 East Asian T2D per WHO criteria Population based-study 103 73 0.39/0.34 PCR-SSCP 0.20
Gloyn [20] 2001 Caucasian T2D patients Population based-study 360 307 0.40/0.36 PCR-SSCP 0.09
Florez [21] 2004 Caucasian T2D per WHO criteria Population based-study 1077 1077 0.47/0.61 Flight mass spectroscopy 0.71
Barroso [22] 2003 Caucasian T2D patients Population based-study 499 494 0.38/0.34 FP-TDI 0.82
Gloyn [23] 2003 Caucasian T2D per WHO criteria Population based-study, Family based-study 854, 150 trios 1182 0.41/0.34 PCR-RFLP 0.53
Hansen [24] 2005 Caucasian T2D per WHO criteria Population based-study 1164 4733 0.40/0.36 PCR-RFLP, LNA 0.52
van Dam [25] 2005 Caucasian T2D per WHO criteria Population based-study 323 296 0.41/0.36 PCR-RFLP 0.56
Yokoi [26] 2006 East Asian T2D per WHO criteria Population based-study 1590 1244 0.38/0.37 MassARRAY 0.64
Liu [27] 2006 East Asian T2D per WHO criteria Population based-study 502 501 0.43/0.38 Sequencing >0.05
Weedon [28] 2006 Caucasian T2D per WHO criteria Population based-study 2332 3592 0.38/0.35 TaqMan >0.05
Sale [29] 2007 Other T2D patients Population based-study 572 587 0.06/0.07 MassARRAY 0.22
Koo [30] 2007 East Asian T2D per WHO criteria Population based-study 758 630 0.44/0.38 TaqMan 0.05
Sakamoto [31] 2007 East Asian T2D per WHO criteria Population based-study 906 889 0.39/0.34 TaqMan 0.72
Saxena [32] 2007 Caucasian T2D per WHO criteria Population based-study 5065 5785 0.49/0.47 Affymetrix GeneChip, MassARRAY >0.05
Vaxillaire [33] 2007 Caucasian T2D per ADA criteria Population based-study 287 2684 0.41/0.39 TaqMan 0.68
Scott [34] 2007 Caucasian T2D per WHO criteria Population based-study 2295 2363 0.49/0.46 Illumina GeneChip, MassARRAY 0.72
Willer [35] 2007 Caucasian T2D per WHO criteria Population based-study 1087 953 0.49/0.44 MassARRAY 0.32
Qi [36] 2007 Caucasian T2D patients Population based-study 682 1078 0.40/0.35 TaqMan 0.38
Cejková [37] 2007 Caucasian T2D per WHO criteria Population based-study 172 113 0.37/0.37 PCR-RFLP 0.26
Doi [38] 2007 East Asian T2D per WHO criteria Population based-study 550 2322 0.39/0.34 TaqMan 0.46
Lyssenko [39] 2008 Caucasian T2D per WHO criteria Population based-study 2201 16034 0.41/0.40 TaqMan >0.05
Alsmadi [40] 2008 Other T2D per ADA criteria Population based-study 550 335 0.21/0.14 TaqMan 0.40
Takeuchi [41] 2008 East Asian T2D per WHO criteria Population based-study 7954 8809 0.38/0.35 Illumina GeneChip, MassARRAY, TaqMan 0.91
Peng [42] 2008 East Asian T2D per ADA criteria Population based-study 275 168 0.69/0.57 PCR-RFLP >0.05
Bronstein [43] 2008 Other T2D patients Population based-study 1131 1147 0.36/0.61 KASPar 0.58
Sanghera [44] 2008 Indian T2D per ADA criteria Population based-study 532 374 0.34/0.38 TaqMan 0.45
Cauchi [45] 2008 Caucasian T2D per WHO criteria Population based-study 2734 4234 0.37/0.37 TaqMan 0.69
Ezzidi [46] 2009 Other T2D per ADA criteria Population based-study 805 503 0.32/0.29 TaqMan 0.56
Zhou [47] 2009 East Asian T2D per WHO criteria Population based-study 1848 1910 0.41/0.39 TaqMan 0.39
Chistiakov [48] 2009 Caucasian T2D per WHO criteria Population based-study 129 117 0.50/0.39 PCR-RFLP >0.05
Wang [49] 2009 East Asian T2D per WHO criteria Population based-study 396 387 0.46/0.37 SNapShot 0.46
Tabara [50] 2009 East Asian T2D per ADA criteria Population based-study 484 397 0.41/0.37 TaqMan 0.30
Thorsby [51] 2009 Caucasian T2D patients Population based-study 750 1879 0.41/0.41 PCR-RFLP 0.18
Hu [52] 2009 East Asian T2D per WHO criteria Population based-study 1849 1785 0.42/0.39 MassARRAY >0.05
Yamauchi [53] 2010 East Asian T2D per WHO criteria Population based-study 4470 3071 0.38/0.37 Illumina GeneChip >0.05
Neuman [54] 2010 Other T2D patients Population based-study 573 843 0.37/0.36 Pyrosequencing 0.22
Chauhan [55] 2010 Indian T2D per WHO criteria Population based-study 2434 2403 0.39/0.32 Golden Gate assay 0.41
Gupta [56] 2010 Indian T2D per WHO criteria Population based-study 209 179 0.40/0.47 Sequencing 0.12
Wen [57] 2010 East Asian T2D per WHO criteria Population based-study 1165 1135 0.41/0.40 MassARRAY 0.10
Rees [58] 2011 Indian T2D per WHO criteria Population based-study 1663 1567 0.38/0.38 TaqMan 0.13
Chavali [59] 2011 Indian T2D per WHO criteria Population based-study 1017 1006 0.39/0.35 Golden Gate assay >0.05
Cheung [60] 2011 Chinese T2D per WHO criteria Population based-study 198 1185 0.33/0.33 TaqMan 0.41
Gamboa-Meléndez [61] 2012 Other T2D per ADA criteria Population based-study 1027 990 0.40/0.37 KASPAR >0.05
Gonen [62] 2012 Other T2D per ADA criteria Population based-study 162 79 0.34/0.30 PCR-SSCP NA

WHO: World health organization, ADA: American diabetes association, MAF: minor allele frequency, LNA: locked nucleic acid assay, FP-TDI: fluorescence polarization template-directed incorporation. SBE-FRET: single-base extension with fluorescence resonance energy transfer; SBE-FP: single-base extension with fluorescence polarization.