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. Author manuscript; available in PMC: 2014 Apr 8.
Published in final edited form as: Nat Commun. 2013;4:1764. doi: 10.1038/ncomms2656

Table 1. Summary of genotyping data against the Reconstructed Sapiens Reference Sequence.

Sub-haplogroup defining SNPs are shown in bold and ‘private’ / as-yet-unknown sequence variants in regular print.

Culture/Age Individual Hg1 Hg H sequence variants compared to RSRS
LBK (5450-4775 BC) HAL36 H23 C10211T
HAL11 H T16093C, G16129A!
HAL32 H26 T11152C
HAL39 H1e G3010A, G5460A
DEB9 H88 A8596G
DEB21 H1j G3010A, T4733C
KAR6a H1bz G1719A, G3010A, C14380T
KAR11b H T152C!
KAR16a H46b C2772T, A11893G
Rössen (4625-4475/4250 BC) OSH2 H89 A6932G, C8068T, T12696C
OSH3 H1 G3010A
OSH1 H16 T152C!, C10394T
OSH7 H5b C456T, G5471A, T16304C, C16519T
Schöningen (4100-3950 BC) SALZ18a H10i C13503T, T14470a, T16093C
SALZ21b H1e7 T1766C, G3010A, G5460A
Baalberge (3950-3400 BC) ESP30 H1e1a5 G3010A, G5460A, (C5960T), A8512G, G8865A, C14902T
HQU4 H7d5 A4793G, C15409T, G16388A
Salzmünde (3400-3100/3025 BC) SALZ57a H3 T152C!, T6776C
SALZ77a H3 T6776C
Corded Ware (2800-2200//2050 BC) ESP15 H6a1a T239C, G3915A, A4727G, G9380A, T11253C, T16362C, A16482G, C16519T
BZH6 H1_TBD G3010A, A8149G, A9377G, T9467C, A13671G, T14319C, T16189C!
Bell Beaker (2500-2200/2050 BC) BZH4 H1e7 G3010A, G5460A, A15220G, A15401G, A16293G
ROT6 H5a3 C456T, G513A, T4336C, G15884A, T16304C, C16519T
ALB1 H3b A2581G, T6776C
ROT1 H3ao2 C4577T, T6776C, C16256T
ROT2 H5a3 C456T, G513A, T4336C, G15884A, T16304C, C16519T
QUEXII1 H4a1 C3992T, A4024G, T5004C, G9123A, C14365T, A14582G, C16519T
QUEXII2 H4a1 C3992T, A4024G, T5004C, G9123A, C14365T, A14582G, C16519T
QLB26a H1 G3010A
QUEXII3 H13a1a2c C2259T, A4745G, G9025A, A13542G, C13680T, C14872T, C16519T
QLB28b H1 G3010A
Unetice (2200-1575 BC) BZH1 H11a T195C!, T961g, T8448C, (G13759A), A16293G, T16311C!, C16519T
BZH8 H2a1a3 G951A, G1438A, G4769A, C6173T, T13095C, A16240t, C16354T, C16519T
BZH14 H82a T195C!, A16220G
EUL41a H4a1a1a5 A73G!, C3992T, A4024G, T5004C, G8269A, G9123A, A10044G, C13545T, C14365T, A14582G, C16519T
EUL57B H3 T152C!, T6776C
QUEVIII4 H7h A4793G, G16213A
Nuragic Bronze Age (1624 BC) - H1aw1 G3010A, A8701G!, C15912T
Iron Age (500 BC) - H90 C5435T, T8911C, T10237C, T15109C
1

Haplogroup H designations based on the http://www.phylotree.org mtDNA tree Build 14 (5 April 2012)19,20.