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Profile collisions per simulated dataset of 10,000 individuals with various population AFs
| AF source | Average collisions per dataset (±SD) |
|---|---|
|
1000 Genomes average |
0.0039 (0.062) |
|
HapMap phase 3: |
|
| CEU |
0.0064 (0.079) |
| CHB |
0.0239 (0.154) |
| JPT |
0.0082 (0.090) |
| YRI |
0.0076 (0.086) |
| Theoretical perfect a | 0.0031 (0.056) |
aAll 24 SNPs assigned an AF of 0.5, which will give the most even trifurcation per SNP, and thus discriminatory power. SD, standard deviation.
